Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01981 ATGGTTGGCGCAGCATTGATAATTCCAAAGATAGAAGCAGATGAGTCATTTGATCGGCAGCCTCTGAACAGTAAAATTCGGTCTCAGTCTGATAGTCGGGAGACCAGAGTTGAAGCAGCAAAACATTTGCCTAAAGGGAACTATCTTGACAAGAATAAGTACTCTGATACCCCTGTAGGTGCTTCTGGTGGTGGTCCCTCTATCTTACCAGTTTCTCAAGGGTCGCGATCATCTTCTTCTGTGAAAGTGTCTACACTTGATCCGGAAGTAAGGCTTACAGAAAAAGAGAAGACACTTCAAGCTCTTGGCTTGATCACCCCCAAGGATGAACCCGTTGATTTTCCTCTGTATGAGGCTCCCATCAAGATGGTGTATCCGGAAAATGGTTCATCACTTCATGGTCAATCTGGTGGACAAGGATTGCAAGTGAAGGTTACTTCTATTGCAAAACTAGTTGGTCATGAGCCTCTGGTGCCTGAATGCAGAGATGGATTCAGAGGCGACGATGAACAATGTTTAACAGACTCTGGAGGCCCAAACTTGGTCTTGGCAACTGTCCCTGAGGAGCTTGATTCTAATGTAGAATTAGCATCCTCATCCTCGGGAGAGGTAAAAATTTCTCTGAGATGCTCCTCAGCCCTGGGGAGACCAGATTTCATAATGCCTGGTCATGATCAACTTCAACAAGTCATTAAAAAGATGGAGGAAAACTACCTGCGGACACATAAGATTATATCTCCAAATTTCTCCCTGACGAAACTCTTGACTGACATTTGTGAATGCTTCTTGGAAGTGGGAACTGATTCAAGTCACAAATTACAGGAAGGAACTGAAAATAAAATGAGAAGTCCTGATGACTTGCCGAAACCTGCGGCCAGTGATGCTTTGGTTGTTAGCTGCAATGGAGAAAATTTATGTGTAAATCCTCTCAACATTCAATGTGCCACTGCATTAGATGATGGAGGAGTTCCACACCTTCCACGATATCTGAATGTTGTTTATGATGGTTGGCAGGCTGGTAAGAAGACTGATTGTCATTCAGATTGTGATGAGAAAAGGGATCGAGTAAAGATTTCATCTACAAACTCCCTTAGTTTGGTTCCCTTTGGGCAGCATGAATTCTCTCATGATGATTTGAGATCCATTCATTATGTTAATGACCTTACAAGAGGAGAAGAAAATGTCAAAATCCCATGGATTAATGAAGTTAACAATGATTTTCCTCCTCCTTTTAGTTATACTGCCGGAAACCTTAAATTCAGTCAAGCTCATGTGGTTATTTGCCTTGCTCAAATTAGGGAGGATAGTTGTTGTTCATCTTGTTCTGGCAATTGTCTCCTGTCTACCACCCCTTGTGCTTGTGCTCATAAATCGGAAGATGGTTTTGCGTATACATCTGAAGGTCTGGTCAAGGAAGACTTCTTGGAGGAGTGTATTGCAATCAGTTGCAACCCTAAAGGTAATCAGTACTATTGTCAGGACTGCCCAGTTGAAAAATCAAAGGGTGAGGACTATTTGGAACCATGTAAGGGACACCTTAGAAGAAAGTTCATTAAAGAATGTTGGAGTAAATGCGGCTGCAGTAAACAATGTGGAAATCGGGTGGTGCAGCAAGGCATAACTTGCAATCTGCAGGTATTTTTTACTTCAGAAGGGAAGAAATGGGGACTTCGAACCCTGAGTCATCTGCCAAAAGGTGCTTTTGTGTGTGAGTTTGTTGGTGAAATATTAACCAACAATGAGTTGTATGAGAGGAGCATGGAGTTCAGAAAAACTGGGAAACATACGTTCCCAGTGCTATTGGATGCAGAATGGGGTTCAGGAGTTTTGAAGGATGATGAAGCTCTTTGCTTGGAGACATCTTCTTATAGCAATATTGCTAGATTTATCAACCACAGATGTTGGGATGCAAACTTGATTGAAATCCCAGTTGAAGTGGAGACCCCTGATCATCACTATTATCATCTTGCCCTTTTCACAACAAGAGAAGTTGCAGCTTTTGAAGAACTCACCTGGGATTATGGCATTAACTTCGATGATCCTGACAGTCTAATGAAAACGTTCTGGTGCAAATGTGGCAGCAAATTCTGCAGAAGCATAAAACGGTCAAATAGGTTGAATAGAGCTGCCTGA 2133 0.4229 MVGAALIIPKIEADESFDRQPLNSKIRSQSDSRETRVEAAKHLPKGNYLDKNKYSDTPVGASGGGPSILPVSQGSRSSSSVKVSTLDPEVRLTEKEKTLQALGLITPKDEPVDFPLYEAPIKMVYPENGSSLHGQSGGQGLQVKVTSIAKLVGHEPLVPECRDGFRGDDEQCLTDSGGPNLVLATVPEELDSNVELASSSSGEVKISLRCSSALGRPDFIMPGHDQLQQVIKKMEENYLRTHKIISPNFSLTKLLTDICECFLEVGTDSSHKLQEGTENKMRSPDDLPKPAASDALVVSCNGENLCVNPLNIQCATALDDGGVPHLPRYLNVVYDGWQAGKKTDCHSDCDEKRDRVKISSTNSLSLVPFGQHEFSHDDLRSIHYVNDLTRGEENVKIPWINEVNNDFPPPFSYTAGNLKFSQAHVVICLAQIREDSCCSSCSGNCLLSTTPCACAHKSEDGFAYTSEGLVKEDFLEECIAISCNPKGNQYYCQDCPVEKSKGEDYLEPCKGHLRRKFIKECWSKCGCSKQCGNRVVQQGITCNLQVFFTSEGKKWGLRTLSHLPKGAFVCEFVGEILTNNELYERSMEFRKTGKHTFPVLLDAEWGSGVLKDDEALCLETSSYSNIARFINHRCWDANLIEIPVEVETPDHHYYHLALFTTREVAAFEELTWDYGINFDDPDSLMKTFWCKCGSKFCRSIKRSNRLNRAA* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01981 710 SUPERFAMILY SET domain 394 698 IPR046341 -
Pte6g01981 710 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 66 708 IPR025776 -
Pte6g01981 710 Pfam SET domain 555 675 IPR001214 GO:0005515
Pte6g01981 710 CDD SET_SETDB-like 443 675 - -
Pte6g01981 710 ProSiteProfiles Pre-SET domain profile. 441 539 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pte6g01981 710 Pfam Pre-SET motif 389 534 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pte6g01981 710 SMART set_7 542 681 IPR001214 GO:0005515
Pte6g01981 710 Gene3D SET domain 388 700 IPR046341 -
Pte6g01981 710 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 57 707 - -
Pte6g01981 710 MobiDBLite consensus disorder prediction 29 49 - -
Pte6g01981 710 ProSiteProfiles SET domain profile. 542 675 IPR001214 GO:0005515
Pte6g01981 710 SMART preset_2 385 526 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pte6g01981 710 MobiDBLite consensus disorder prediction 18 82 - -
Pte6g01981 710 MobiDBLite consensus disorder prediction 68 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01981 Pte-Chr6 36342164 36347661 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01981 387 698 Su(var)3-9 homologs AT1G73100 27.660 3.72e-28 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pte6g01981 Pre-SET 1.1e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01981 - - qlo:115959637 618.231