Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01975 ATGGAGGACAACATGCAACTGAAATTTCTCTTGGTCTTCTTCTTGTTTTCTTATCGTGGCATTACTTGTTTCTCTCTCAGTCCTGCTGCGGAAGTGAAAGATGAACTGTCGGCTCTACTTTCCGTAAAATCCAGTCTTGTTGATCCCTTGAACAGCTTGAGGGATTGGAAATTGGTGAAAGAGAATGCAACACATTGTCAGTGGACTGGTGTTGGGTGCAACTCTGTTGGAGCAGTTGAGAAGCTTGATCTCTCCCACATGAATCTGAGTGGACATTTGCCAAATGAGATACAATGGTTGAAAGATCTCAAATCATTGAACTTGTGCTGCAACAGTTTCTCATCATCCTTAGCAAAATCCATAGCCAACCTCACTGCAATGCAGTATCTTGACGTCAGCCAGAATTTCTTCGTTGGAGACTTCCCAATTGGCTTTGGAAAGGCCACGACTTTAAAAACATTAAATGCGTCAAGCAACGACTTCTCAGGTTTTCTTCCTGAAGACATTGGCAATGCTTCTTCCTTGGAGTTGTTGGATCTAAGGGGTAATTTCTTTGAAGGGTCAATTCCAAAATCGTTTGGGAATCTGCAGAAGCTGAAATTCCTTGGTCTTTCAGGGAACAATCTCACTGGGGAAATCCCAAGAGAGATAGGCCAGATTTCATCATTGGAGACCATGATTCTTGGCTACAATGAATTTGAAGGAGGGATTCCCATAGAACTTGGAAACCTCACCAATCTGAAGTATCTTGACTTGGCTGTAGGTGATCTTGGTGGTGGAATTCCAGCTGAACTGGGGAAGCTGAAGCAGCTTGAGACAATTTTCTTGTACAGAAACAATTTCAAAGGCAGAATACCTCCAACCATTGGAAACATGACATCGCTAGTTTTGCTGGATCTTTCTGATAATCTGTTGTCGGGAGATATTCCAAGTGAGATAAATCAGATGAAGAACTTGCAGCTTCTAAATTTGATGTGCAACCAGTTAACTGGTTCAGTTCCGGCTGGCTTAGAAAATTTGCCTCAATTGCAGGTGCTTGAGCTGTGGAACAATTCTATGTCAGGACCGTTGCCTAGAGATCTTGGCAAGCTCTCACCATTGCAATGGTTGGACATATCATCCAACTCATTCTCTGGTGAGATTCCTCAAGCACTGTGCAACAAGGGCAATCTGACCAAGCTCATCCTTTTCAACAATGCCTTCTCAGGTTCCATTCCAGCCAGTCTATCAACCTGTCTTTCTCTTGTTCGAGTTCGAATGCAGAACAATTTTCTTTCTGGCACCATACCTGTTGGTTTTGGCAAACTTAGTAAGCTTCAGAGGTTAGAGTTAGCAAATAATAATCTAACTGGTCGAATCCCAGATGATATTACTTCTTCTGCATCGCTTTCTTTCATCGATTTTTCCAGAAACTCTCTGCATTCTTCTCTTCCTTCCACCATTTTTGCAATCGCAAGTCTGCAAGTCTTCAAGGCCTCAAATAACAACTTAATAGGCCAAATTCCAGATCAGTTCCAGGACTATCCTGTACTTTCAACACTTGATCTCTCTTTTAACCATTTGTCTGCAAGCATCCCGGCAAGCATGGGTTCGTGTCAGAAGTTGGTCAATTTGAACCTAAAGAACAACTTGCTGACAGGACATATCCCAAATGCTATTGCAACGATGCCCACATTAGCAGTGCTTGATTTGTCCAACAACTCTCTGACCGGTGCAATACCTGAAAACTTTGGCCTCTCGCCGGCCTTAGAAGCAGTCAATGTCTCCTACAACAAGCTAGAAGGTCCTGTTCCAGCGAATGGTGTCCTAAGGACAATTAACCCCAATGATCTTGTAGGCAATTCTGCTCTTTGTGGTGGTGTCTTACCACCATGCAACCAGAATTCTGCATCCACCGCAAGCCACGGAAGCTCGTGGGGAAAGCACATCAGCCTATGGCTCGTCGGAATATCATCTATCCTAGCAATTGGAATTGCAGTTGTGGGAGCTCGATCTCTGTACCAGAAATGGTATACAGAAGGAGGTTGCTTCCTCCGAAAGGACAATGGAGATTGGCCGTGGAGATTAATGGCATTTCAGAGGCTTGGTTTTACGAGTGCAGATATTCTAGCATGCATCAAGGAATCAAATATAATCGGAATGGGGGCAACTGGAATTGTTTATAAGGCCGACATGCCGAGGTCTGATACAGTGTTGGCAGTAAAGAAGTTGTGGCAATCATCAGGAACTGATATTGAATCTGGAGGAGGCAGTGAAGATCTCATTGGAGAAGTGAATGTTCTTGGAAGACTAAGACATAGAAACATAGTCAGGTTATTAGGATTGCTTCATAATGACAGTGAAGTAATGATGGTCTATGAATATATGCAGAACGGAAATCTTGGCGACGCCTTGCATGGCAAGCAAGCAGGAAGGTTGCTTGTAGACTGGGTTTCCCGGTACACCATAGCACTTGGAGTGGCACAAGGCCTTGCCTATCTCCATCATGATTGCCACCCTCCCATCATCCACCGGGATATTAAATCAAATAACATATTGCTGGATGCCAATCTGGAGGCGAGGATAGCCGATTTTGGATTAGCCAGAACCATGATCAGGAAGAATGAGACTGTTTCGATGGTAGCTGGATCCTATGGCTACATAGCCCCAGAATATGGATACACTTTGAAGGTTGACGAAAAGATTGACATATATAGTTTTGGGGTGGTCTTGTTAGAACTTCTCACAGGAAAACGTCCATTAGATCCAGAATTTGGAGAATCCGTGGACGCGGTTGAATGGATTAGAAGAAAGATTAGAGACGGCAAATCTCTAGAAACAGTTTTAGACCCGAGTGTAGGAAGCTGCAAGCATGTTCAAGAAGAAATGCTTCTAGTCCTTAGAATAGCCTTTGTTTGCACAGCCAAGCTTCCCAAAGAGAGGCCATCTATGAGGGATGTTATCACAATGCTTAGAGAGGCAAAACCTAGAAGGAAAAGCAGTAGCAGTGGTGAAGCAGTAGAAACTAACGATGAGAAGCTAGTTTATAGCACATCACCAGTAAGTGGCCTTTTGTAA 3057 0.436 MEDNMQLKFLLVFFLFSYRGITCFSLSPAAEVKDELSALLSVKSSLVDPLNSLRDWKLVKENATHCQWTGVGCNSVGAVEKLDLSHMNLSGHLPNEIQWLKDLKSLNLCCNSFSSSLAKSIANLTAMQYLDVSQNFFVGDFPIGFGKATTLKTLNASSNDFSGFLPEDIGNASSLELLDLRGNFFEGSIPKSFGNLQKLKFLGLSGNNLTGEIPREIGQISSLETMILGYNEFEGGIPIELGNLTNLKYLDLAVGDLGGGIPAELGKLKQLETIFLYRNNFKGRIPPTIGNMTSLVLLDLSDNLLSGDIPSEINQMKNLQLLNLMCNQLTGSVPAGLENLPQLQVLELWNNSMSGPLPRDLGKLSPLQWLDISSNSFSGEIPQALCNKGNLTKLILFNNAFSGSIPASLSTCLSLVRVRMQNNFLSGTIPVGFGKLSKLQRLELANNNLTGRIPDDITSSASLSFIDFSRNSLHSSLPSTIFAIASLQVFKASNNNLIGQIPDQFQDYPVLSTLDLSFNHLSASIPASMGSCQKLVNLNLKNNLLTGHIPNAIATMPTLAVLDLSNNSLTGAIPENFGLSPALEAVNVSYNKLEGPVPANGVLRTINPNDLVGNSALCGGVLPPCNQNSASTASHGSSWGKHISLWLVGISSILAIGIAVVGARSLYQKWYTEGGCFLRKDNGDWPWRLMAFQRLGFTSADILACIKESNIIGMGATGIVYKADMPRSDTVLAVKKLWQSSGTDIESGGGSEDLIGEVNVLGRLRHRNIVRLLGLLHNDSEVMMVYEYMQNGNLGDALHGKQAGRLLVDWVSRYTIALGVAQGLAYLHHDCHPPIIHRDIKSNNILLDANLEARIADFGLARTMIRKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSFGVVLLELLTGKRPLDPEFGESVDAVEWIRRKIRDGKSLETVLDPSVGSCKHVQEEMLLVLRIAFVCTAKLPKERPSMRDVITMLREAKPRRKSSSSGEAVETNDEKLVYSTSPVSGLL* 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01975 1018 SUPERFAMILY L domain-like 334 624 - -
Pte6g01975 1018 SUPERFAMILY RNI-like 81 426 - -
Pte6g01975 1018 PANTHER RECEPTOR-LIKE PROTEIN 55 436 988 - -
Pte6g01975 1018 Pfam Protein kinase domain 708 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01975 1018 Gene3D Transferase(Phosphotransferase) domain 1 793 1010 - -
Pte6g01975 1018 Pfam Leucine rich repeat 534 593 IPR001611 GO:0005515
Pte6g01975 1018 SUPERFAMILY Protein kinase-like (PK-like) 705 984 IPR011009 -
Pte6g01975 1018 ProSiteProfiles Protein kinase domain profile. 706 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01975 1018 Gene3D Ribonuclease Inhibitor 32 256 IPR032675 -
Pte6g01975 1018 SMART serkin_6 706 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01975 1018 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 184 284 - -
Pte6g01975 1018 Pfam Leucine Rich Repeat 174 196 IPR001611 GO:0005515
Pte6g01975 1018 Gene3D Ribonuclease Inhibitor 257 316 IPR032675 -
Pte6g01975 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Pte6g01975 1018 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 367 629 - -
Pte6g01975 1018 MobiDBLite consensus disorder prediction 987 1018 - -
Pte6g01975 1018 Gene3D Ribonuclease Inhibitor 317 633 IPR032675 -
Pte6g01975 1018 SMART LRR_typ_2 196 220 IPR003591 -
Pte6g01975 1018 SMART LRR_typ_2 340 364 IPR003591 -
Pte6g01975 1018 SMART LRR_typ_2 556 579 IPR003591 -
Pte6g01975 1018 SMART LRR_typ_2 436 460 IPR003591 -
Pte6g01975 1018 SMART LRR_typ_2 508 532 IPR003591 -
Pte6g01975 1018 SMART LRR_typ_2 292 316 IPR003591 -
Pte6g01975 1018 FunFam MDIS1-interacting receptor like kinase 1 793 1003 - -
Pte6g01975 1018 Gene3D Phosphorylase Kinase; domain 1 706 792 - -
Pte6g01975 1018 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 32 183 - -
Pte6g01975 1018 ProSitePatterns Protein kinases ATP-binding region signature. 712 736 IPR017441 GO:0005524
Pte6g01975 1018 Pfam Leucine rich repeat N-terminal domain 33 74 IPR013210 -
Pte6g01975 1018 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 696 788 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01975 Pte-Chr6 36308687 36311870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01975 12 1019 Receptor kinase-like Gene Family AT1G08590 59.205 0.0 1169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte6g01975 Pkinase 4.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01975 - - qsa:O6P43_010449 1513.82