Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01962 ATGCCAACTTTGCTTCGTTTCTTTCTCCCGTTTCTCCATCTACTAGTCTGTTGCTCAGGGCATTCCTTATCGTCTATATTTTTGTCTCCTATTCCATTACCATATAAGCACATATCTTTCGGAGAGATCTTAGCTGAACATGTCAGGGCGCTAGCCAATAGTGTGTCATTTGCTGCAAAACCAGCGAACTTGTGGTTAAAGCCGTCTTTGGGACCATCTGCTGCCCCTGCCCCTTCTCCCTCTAATAAAGGTCATGGTATTATTCGTGCATCCAGGCACCATCATCATTGGCATCATCAACACCATGATGTGAGACCGCGTGTGATTGCTCCATCTCCTACTAATGATCCAGCTTGTGCTCAAATCTGTGTGGATCCACTCACTTCAACACCCTTTGGCTCACCCTGTGGCTGTGTCATTCCTATGAAAGTTAAACTTCTTCTTGATGTAGCTCCTTATTCAATTTTCCCTGTAATGGACGAGTTAGAAATTGAAGTTGCTTCAGGCACTTATTTGGAACAAAGTCAGGTGAAAATAATGGGTGCTAGTGCCGATACCGAAAACCAGGGAAAAACACTAGTTGATATCAACTTGGTTCCTTTGGGAGAAAAATTTGACAATACCACTGCAATTTTGACATATGAAAGATTTTTGCATAAAAAGGTCCCTCTTAATAAGAGCCTTTTTGGTGGTGATTACACTGTGGTGTACATTACTTATCCAGGCCTACCTTCATCCCCACCATTTGGAAGTTACGTCGGGAGTGGTCCAAGTGAAAGTAATGAAAACCTGCCGATATCTGCAACTTTTGTGACAAAGAACCAGAAATTGAATATTAGAACCATAGTCATCGTTGCTTTATCCGGATTTGTGCTCTTATTGGTGATCGTTGGGACATTTTCTATCATTCTCAAGTGGAGGAAGGCTAGAAGACATTCAAATGCAGTTGGTCCTGTGTTTGCACCGCCTATGAACAAGAAATCTGGCACAGTATCTATATTGTCAAGTAGTATCGTCAGCTCAACATCTGGATCCCTTATGTCAACCATGGCTGCTTGCATGCTGTCTGTCAAGACATTTGCACTTTCTGAACTTGAGAAGGCAACATATAAGTTCAGTTCAAAGAGAGTTCTTGGAGAAGGTGGTTTTGGGAGGGTGTATCATGGTCTGATGGAAGATGGAAGTGAAGTTGCTGTTAAATTGCTTACAAGGGATAATCAAAATGGAGACCGAGAATTTATTGCAGAAATTGAGATGCTTAGTCGCTTGCATCACCGTAATCTTGTCAAACTCATTGGTATTTGCATTGAAGGTCACACACGATGTTTGGTTTATGAACTTGTTCACAACGGCAGTGTTGAGTCCCATCTGCATGGTCCTGACAAGAAAAAAGGACCTCTTGACTGGGAAGTGCGGATGAAAATTGCTCTTGGGGCTGCCAGAGGACTGGCTTATCTTCATGAAGATTCTAATCCTCGCGTAATTCACCGCGACTTTAAAGCTAGCAATGTGTTATTAGAAGATGACTTCACCCCAAAGGTTTCAGATTTTGGGTTGGCAAGGGAAGCGACGGAAGGGAGTCGTCATATCTCAACTCGTGTCATGGGAACTTTTGGATATGTTGCACCAGAATATGCGATGACAGGTCATTTACTCGTGAAGAGTGATGTATATAGCTACGGTGTTGTATTGCTTGAACTTCTCACAGGAAGAAAACCTGTGGACATGTCTCAGCCTCCCGGACAGGAGAATCTTGTCACTTGGGCACGACCACTTTTGACCAGTAGAGAAGGCTTAGGACAGCTTGTTGATCCAACTTTAGCTGGAAGCTATGACTTTGATAACATGGCAAAGGTGGCAGCTATTGCTTCCATGTGCGTTCATCCAGAAGTAACCCACAGACCTTTCATGGGTGAAGTGGTGCAAGCTCTAAAGCTGATATACAATGATGCAGACGGAACGTGTGGAGATGGTTATAGTCGGAAGGAATCTTCTGCTCATGAGTCTGACCTTAGAGGAGACCTTGCTCCTTCTGAGAGCAGTTGGTGGAATGCTGGAGGGATAACCCCTCGATTAACTTACGGTCAAGCCTCTTCTTTTATCACAATGGACTACAGTTCTGGGCCACTTGAGGAAGTGGAGAATAAACCATTTTCGGCTTCTAGTTTGTTTGGAGATGATATGTCTTTGCCCATCAGGCACGGGAACAGATCCGGTCCCCTCAGAACTGTCCGAAGCAAACCATACTTCTATAGATTTTCAGGAAGTCGGAGTGAACATGGGGGTTTGCTTGGAAAACGTCTTTGGAACGACGATTATTGGGTTTGA 2328 0.4381 MPTLLRFFLPFLHLLVCCSGHSLSSIFLSPIPLPYKHISFGEILAEHVRALANSVSFAAKPANLWLKPSLGPSAAPAPSPSNKGHGIIRASRHHHHWHHQHHDVRPRVIAPSPTNDPACAQICVDPLTSTPFGSPCGCVIPMKVKLLLDVAPYSIFPVMDELEIEVASGTYLEQSQVKIMGASADTENQGKTLVDINLVPLGEKFDNTTAILTYERFLHKKVPLNKSLFGGDYTVVYITYPGLPSSPPFGSYVGSGPSESNENLPISATFVTKNQKLNIRTIVIVALSGFVLLLVIVGTFSIILKWRKARRHSNAVGPVFAPPMNKKSGTVSILSSSIVSSTSGSLMSTMAACMLSVKTFALSELEKATYKFSSKRVLGEGGFGRVYHGLMEDGSEVAVKLLTRDNQNGDREFIAEIEMLSRLHHRNLVKLIGICIEGHTRCLVYELVHNGSVESHLHGPDKKKGPLDWEVRMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVTWARPLLTSREGLGQLVDPTLAGSYDFDNMAKVAAIASMCVHPEVTHRPFMGEVVQALKLIYNDADGTCGDGYSRKESSAHESDLRGDLAPSESSWWNAGGITPRLTYGQASSFITMDYSSGPLEEVENKPFSASSLFGDDMSLPIRHGNRSGPLRTVRSKPYFYRFSGSRSEHGGLLGKRLWNDDYWV* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01962 775 PANTHER OS01G0750732 PROTEIN 111 668 - -
Pte6g01962 775 FunFam Receptor-like serine/threonine-protein kinase ALE2 448 666 - -
Pte6g01962 775 SUPERFAMILY Protein kinase-like (PK-like) 357 642 IPR011009 -
Pte6g01962 775 Gene3D Transferase(Phosphotransferase) domain 1 448 662 - -
Pte6g01962 775 ProSiteProfiles Protein kinase domain profile. 372 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01962 775 CDD STKc_IRAK 378 647 - -
Pte6g01962 775 Pfam Protein tyrosine and serine/threonine kinase 374 643 IPR001245 GO:0004672|GO:0006468
Pte6g01962 775 ProSitePatterns Protein kinases ATP-binding region signature. 378 400 IPR017441 GO:0005524
Pte6g01962 775 FunFam receptor-like serine/threonine-protein kinase ALE2 345 447 - -
Pte6g01962 775 Gene3D Phosphorylase Kinase; domain 1 345 447 - -
Pte6g01962 775 ProSitePatterns Serine/Threonine protein kinases active-site signature. 494 506 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01962 Pte-Chr6 36239201 36246524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01962 115 761 Receptor kinase-like Gene Family AT5G56890 53.582 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pte6g01962 PK_Tyr_Ser-Thr 7.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01962 - - qsu:112022820 1157.13