Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01959 ATGTTTTTACCAGGGGAAGATGTCTATGCCGGAGCTTGGCCAGAGGCAAGGGAGTTTGTCACTGTCATTGACCATGGAGTTACGGACACTGTTTGGAATAAGGAAATATTAGTGGGGAATAAGAACTTGATGATAAAACACAATGTTGTCACTCCTGCTGATGCCGAGGACATACTTGCAGAAAGTGAAGAAATGGCTCAAACTGTAAATTTGGTATCAATAAATGGGGAATTGACCGGCATGATAGCTGTGTCGGATCCAATAAAACCTGGCGCTCAAGATGCCATTGCTATCTTCAAGTCTATGAAAATTAGGACCATCATGGTCACGGGTGATAACTGGGAAACTGCTAATTCGATTGCAAAAGAAGTTGGAATCGAAACAGTTATTGCTGAGGCTAAACCAGATCAAAAGGCAGAGAGATTAAAGGAGTTGTGTACTTAA 444 0.4189 MFLPGEDVYAGAWPEAREFVTVIDHGVTDTVWNKEILVGNKNLMIKHNVVTPADAEDILAESEEMAQTVNLVSINGELTGMIAVSDPIKPGAQDAIAIFKSMKIRTIMVTGDNWETANSIAKEVGIETVIAEAKPDQKAERLKELCT* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01959 147 FunFam copper-transporting ATPase 1 isoform X2 82 127 - -
Pte6g01959 147 Gene3D - 89 145 IPR023214 -
Pte6g01959 147 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 9 145 - -
Pte6g01959 147 Gene3D - 13 88 IPR023299 GO:0000166
Pte6g01959 147 NCBIfam HAD-IC family P-type ATPase 55 143 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte6g01959 147 Pfam haloacid dehalogenase-like hydrolase 12 145 - -
Pte6g01959 147 SUPERFAMILY HAD-like 24 146 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01959 Pte-Chr6 36225831 36227422 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01959 12 145 Primary Pumps ATPases AT1G63440 65.672 1.96e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01959 K17686 - qsa:O6P43_034232 202.216