Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01958 ATGCTACGTTCTGGGCTTTCCTTTAGTAAAGATTCATCGTTCAATCATTGGCAAGGCATTGTTGAAAGCCTCAATACCATCCTCTGTTTATTGAAAGAAAATTTCGTGCCTCCAATTCTCTTTCAGAAGATCTTCGCTCGGTCCTTCTCGTTTATCAATATACAACTCTTTAATAGTCTTCTTCTGCAACATGAGTGTTGCACATTCAGCAATCGGGAATATGTCAAAGCTGGATTAGCTGAACTAGAGTTATGGTGCTGTCAAGCAAAGGAGGAGTGTGTAGGATTGTCATGGGATGAGCTTAAGCACATAAGGCGAGCTGTTGGATTCTTGGTAATACATCAGAAGTACAGAATCTCCTATGACGAATTTATCGATGATCTATGCCCCATCCCAAGTGTTCAACAGCTGTATCGAATATGCACACTTTACTGTGACGACCAATATAACACCCGAAGTGTGTCTCCCAGTGTAATTCTAGCATGA 486 0.4115 MLRSGLSFSKDSSFNHWQGIVESLNTILCLLKENFVPPILFQKIFARSFSFINIQLFNSLLLQHECCTFSNREYVKAGLAELELWCCQAKEECVGLSWDELKHIRRAVGFLVIHQKYRISYDEFIDDLCPIPSVQQLYRICTLYCDDQYNTRSVSPSVILA* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01958 161 SMART DIL_2 43 150 IPR002710 -
Pte6g01958 161 ProSiteProfiles Dilute domain profile. 1 161 IPR002710 -
Pte6g01958 161 PANTHER DILUTE DOMAIN-CONTAINING PROTEIN YPR089W 13 157 - -
Pte6g01958 161 Pfam DIL domain 44 146 IPR002710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01958 Pte-Chr6 36217355 36220754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01958 1 159 Myosins gene family AT5G43900 72.956 1.18e-76 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01958 K10357 - qsa:O6P43_010431 270.781