Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01952 ATGTCAAATTCAGATGGTAGTTCGAGCAAGGTTGCCAGAGCATTAGTAGTAGAAGATAGTATCACAATCCAAAAGATTCACCGGGGGCTCTTGAAGAAACCGGGAGTGATGGAAACCCAGTGTGTGGGAAACGGAAAGGAAGCAGTAGATATCCACTACAAGCAGGTGAGAGAGCACTTTGACCTGATTCTCATGGATATGGACATGCCTATCATGAATGACATTAAGGCAACCAAGAGACTGCGTGCTATGAGCATACGTAGCACGATTGCAGGCGTGGCCACCCGCTCCACTGAAGAAGAAATTCAAGAATTCAGGGAAGCTGGGTTGGATGCTTACCTAGAGAAGCCTTTAACCATGCTCAAGCTGTCGTCTATTCTCGACAAGATGAACCATTATGGTTGA 405 0.4617 MSNSDGSSSKVARALVVEDSITIQKIHRGLLKKPGVMETQCVGNGKEAVDIHYKQVREHFDLILMDMDMPIMNDIKATKRLRAMSIRSTIAGVATRSTEEEIQEFREAGLDAYLEKPLTMLKLSSILDKMNHYG* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01952 134 Pfam Response regulator receiver domain 15 126 IPR001789 GO:0000160
Pte6g01952 134 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 132 - -
Pte6g01952 134 SUPERFAMILY CheY-like 13 130 IPR011006 -
Pte6g01952 134 SMART REC_2 12 127 IPR001789 GO:0000160
Pte6g01952 134 Gene3D - 1 133 - -
Pte6g01952 134 CDD REC_hyHK_CKI1_RcsC-like 15 127 - -
Pte6g01952 134 ProSiteProfiles Response regulatory domain profile. 13 131 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01952 Pte-Chr6 36053167 36053718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01952 10 127 Response Regulator Gene Family AT3G04280 39.496 7.46e-19 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte6g01952 Response_reg 3.1e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01952 - - rcu:8262779 137.887