Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01944 ATGGCGACTTTTGCTAAGCCAGAGAATGCTCTGAAACGAGCTGAAGAATTAATCAATGTTGGACAGAAACAAGATGCTCTTCAAACTCTTCATGACCTTATCACTTCCAAAAGATATAGAGCATGGCAGAAAACCCTTGAAAGGATTATGTTCAAATATGTGGAGCTTTGTGTTGAGATGCGGAGAGGCCGATATGCCAAGGATGGTCTCATCCAATATAGAATTATATGCCAGCAAGTGAATGTTAGTTCATTGGAGGAGGTGATAAAACATTTTATGCATCTTTCAACAGAGAAAGCTGAACATGCTCGGAGTCAGGCACAGGCCTTGGAAGAAGCTCTTGATGTGGAGGACTTGGAGGCTGATAAAAGGCCAGAGGATCTGATGCTGAGTTACGTGAGTGGAGAGAAAGGAAAGGATAGATCTGATCGGGAGCTTGTCACTCCGTGGTTTAAATTTCTATGGGAAACATACAGGACTGTGCTTGAGATTTTACGGAACAACTCAAAACTGGAAGCTTTATATGCTATGACGGCACATCGGGCATTCCAGTTCTGTAAGCAGTACAAGCGAACAACAGAGTTTCGCAGGCTTTGTGAAATTATAAGGAACCATCTTGCTAATCTTAATAAATACCGAGACCAGAGAGATCGACCTGATCTGACTGCTCCTGAAAGCTTGCAGCTATATCTTGACACAAGACTTGAGCAGCTCAAAGTTGCAACAGAACTTGAAATGTGGCAGGAAGCTTTTCGATCAATTGAAGATATTCATGGACTTATGTCGTTGGTCAAGAAAACTCCCAAGGCATCTCTGTTGGTTGTCTATTATGCTAAGCTGACCGAGATATTTTGGATATCTGGAAGCCATCTGTATCATGCGTATGCTTGGTTCAGGCTGTTCCTGCTGCAAAAAAGCTTTAATAAGAATCTCACGCAGAAGGACTTGCAGTTAATAGCATCATCTGTTGTTTTGGCTGCTCTTTCAATACCTCCATATAATCGTACCCATGGTGTATCTCACTTGGAGCTTGAGCATGATAAAGAAATAAACATGAAGATGGCTAATCTTATTGGGTTTAATCTTGAAATTAAACCTGAGAGTAGAGAAGTGCTCTCAAGGTCCTCCCTTCTCTCTGAACTGGTGTCAAAAGGTGTTATGTCTTGCGCTAGTCAGGAAGTAAAAGATGTGCACCATCTTCTAGAACACGACTTTACTCCACTGGATCTTACAGGACAAATTCAGCCCTTGCTTACCAAAATCTCTAAGTTTGGAGGTAAGATTTCTTCAGCTCCTTCTGTCCCAGAGGTGCAGTTGTCTCAATACATTCCTTCCCTGGAGACTCTTGGTACTTTGAGGTTGCTGCAGCAGGTTTCCAAAATTTACCAGACAATGAAGTTTGAGACTCTGTCTAGCATGATCCCGTTTTTTGATTTTGCTGCTGTTGAAAGGATTTCCGTGGATGCTGTCAAGCATAATTTTGTCCAGTTGAAAGTTGACCATATGAGCAATTGCATTGTCTTCTGTGAGATGAGTCTTGAGTCTGATGGCTTATTTGATCAACTAGCAAAATTGGTGGAAGAGTTGAATGTTGCAAGATCAATGATCTATCCCCCTGTGAAGAAAGAAACCAAAATTAGTGATATACTACCCAACCTGTATGAAACTTTGGAGAAAGAACACAAGAAACTTTTGGCTCGCAAATCAGTGATTGAAAAGCGCAAGGAAGACCAAGAAAGGCAGCTTCTGGAAATGGAACGCGAGGAGGAAACAAAGCGACTAAGACTACGGAAGATAACAGAAGAAGCAGAACAAAGAAGACTTGCAACTGAGTATGAGCAAAGGAAGAACCAAAGGATTCTCAGGGAAATACAGGAGAAGGAGCAGGAGGAAGCTCAGGCTGTTCTGGAAGAGCTTAAAAAGAAGGGGAAGAAGCCAGTAATAGAAAAGGATAAACTGACAAAAGAAACATTGAGGGAGTTGGCTTTGAGTGAGCAACTACGGGAAAAGCAGGAAATGGAAAAGAAATTGCAAAAACTAGCCAAGACTATGGACTATCTGGAGAGAGCAAAAAGGGAAGAGTCTGCTCCATTGATTGAAGCTGCTTATCAACAGCGGTTAGTGGAAGAGAGACTTCTTCATGAGCACGAGCAACAACAAGAGACTGCACTCAGTAAGCAGCGCCATGAGGGGGACCTGAAGGAGAAGGAGAGATTGGCCCGAATGAAAGATAATAAGGAAATATTTCAAGAAAGAGTTGTCAGTCGACGCCAATCAGAATTTGATAGATTAAGGAAGGAAAGAGAAGAGCGTATCTCAAGCATTTTACAATCGAGAAAACAGGAAAGGGAAAAAATGAGAAAGCTGAAATATTATTTGTTGTTGGAAGAAGAAAGGCAGAGAAAAATGCTTGAGGAGGAGGAAGCTCGAAAGCGAGAAGAGGTTGAGAGGCGCAAAAAGGAAGAGGCAGAACGCAAAGCCAAACTGGATGAGATTGCCGAGAAGCAGAGGCAAAGGGAGAGGGAAGCGGAAGAAAAGGAGAAGCTCAGAAGAGAGTCACTTCTTAAATCCACTGAAGCAGCAAGGCTCTCTGAACCTCCAGCACAAGCTGCTGCTGCTACCCGTCCATCAGATTTGGGGTCTGCTACTGGTACTGGAGCAGCAAATCCTGGAAAATATGTTCCCAGGTTCCGGCGAGCTGAAAGCTCTGGTCATGCTGCTCCTGAACCTGATCGATGGGGCCACAGCAATAGCAGCAGGCAAGATGACAGGATGCCACCTGCGAATGATCGGTGGCGTGGTGATGATCGTAGATCCTCTTTCAGTGGTTCAAGGTCATCATCTACATGGTCTTCCTCCAGAAATGCCACACGTGGGTCTGATCGTTGA 2889 0.4348 MATFAKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVEMRRGRYAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEHARSQAQALEEALDVEDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLTAPESLQLYLDTRLEQLKVATELEMWQEAFRSIEDIHGLMSLVKKTPKASLLVVYYAKLTEIFWISGSHLYHAYAWFRLFLLQKSFNKNLTQKDLQLIASSVVLAALSIPPYNRTHGVSHLELEHDKEINMKMANLIGFNLEIKPESREVLSRSSLLSELVSKGVMSCASQEVKDVHHLLEHDFTPLDLTGQIQPLLTKISKFGGKISSAPSVPEVQLSQYIPSLETLGTLRLLQQVSKIYQTMKFETLSSMIPFFDFAAVERISVDAVKHNFVQLKVDHMSNCIVFCEMSLESDGLFDQLAKLVEELNVARSMIYPPVKKETKISDILPNLYETLEKEHKKLLARKSVIEKRKEDQERQLLEMEREEETKRLRLRKITEEAEQRRLATEYEQRKNQRILREIQEKEQEEAQAVLEELKKKGKKPVIEKDKLTKETLRELALSEQLREKQEMEKKLQKLAKTMDYLERAKREESAPLIEAAYQQRLVEERLLHEHEQQQETALSKQRHEGDLKEKERLARMKDNKEIFQERVVSRRQSEFDRLRKEREERISSILQSRKQEREKMRKLKYYLLLEEERQRKMLEEEEARKREEVERRKKEEAERKAKLDEIAEKQRQREREAEEKEKLRRESLLKSTEAARLSEPPAQAAAATRPSDLGSATGTGAANPGKYVPRFRRAESSGHAAPEPDRWGHSNSSRQDDRMPPANDRWRGDDRRSSFSGSRSSSTWSSSRNATRGSDR* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01944 962 Gene3D - 352 494 - -
Pte6g01944 962 Gene3D - 268 342 - -
Pte6g01944 962 FunFam Eukaryotic translation initiation factor 3 subunit A 352 494 - -
Pte6g01944 962 MobiDBLite consensus disorder prediction 915 940 - -
Pte6g01944 962 Coils Coil 554 602 - -
Pte6g01944 962 MobiDBLite consensus disorder prediction 941 962 - -
Pte6g01944 962 Coils Coil 794 852 - -
Pte6g01944 962 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 529 IPR000717 -
Pte6g01944 962 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 954 IPR027512 GO:0005852
Pte6g01944 962 MobiDBLite consensus disorder prediction 715 734 - -
Pte6g01944 962 MobiDBLite consensus disorder prediction 803 962 - -
Pte6g01944 962 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Pte6g01944 962 Pfam PCI domain 373 508 IPR000717 -
Pte6g01944 962 Gene3D UVR domain 217 267 - -
Pte6g01944 962 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Pte6g01944 962 MobiDBLite consensus disorder prediction 803 858 - -
Pte6g01944 962 Coils Coil 610 642 - -
Pte6g01944 962 Coils Coil 93 120 - -
Pte6g01944 962 Coils Coil 663 693 - -
Pte6g01944 962 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 946 IPR027512 GO:0005852
Pte6g01944 962 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01944 Pte-Chr6 35995313 36004135 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01944 1 962 Eukaryotic Initiation Factors Gene Family AT4G11420 70.309 0.0 1293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01944 K03254 - gmx:100782598 1235.71