Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01943 ATGAAACCCTTAGATGTTTTGATGAAAATACCAATTATACATCTCAACTTTGATCATAAATGTGTACTATTTTCTGCAGAAATATCGAATCACTTTTATCTGACAATGACTCCTGCTATGACCAATCCTGGATCTGGACAAGAGGCTATGAAGCATATCTCTTCATTGACTGTCAAGGGTCCTGTACCAAAAGCTTTGGTAATTGATGAAGATGCGACCTGTCGAATGATAGAGCAGGCATTTATAGCTTCATTGGTAATTGATACTGATGCAGTGGACAGTACTTCTCGGGCACTAGATCTCCTTGCCTCTGGTGCGACATTTGATTTCATATTGATAGAAAAGACTGTGCGAAATCCTGATGGGTTAGAGACGGTAAGACAGATGCGTGCTATGGGTGTCCGAAGCAGGATTGTGGTAGTTGCTGTTGAATACTCTGATGCAGAAACAAATGCACTTCTTGCAGCTGGGGCAGACATTTGCATAGGGAAAAAGCTTTCTCCAGCTATCTTAGCAAGAGCCCTTGCAATCGTGCCTAACTAG 543 0.418 MKPLDVLMKIPIIHLNFDHKCVLFSAEISNHFYLTMTPAMTNPGSGQEAMKHISSLTVKGPVPKALVIDEDATCRMIEQAFIASLVIDTDAVDSTSRALDLLASGATFDFILIEKTVRNPDGLETVRQMRAMGVRSRIVVVAVEYSDAETNALLAAGADICIGKKLSPAILARALAIVPN* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01943 180 PANTHER TWO-COMPONENT RESPONSE REGULATOR 41 177 - -
Pte6g01943 180 ProSiteProfiles Response regulatory domain profile. 64 179 IPR001789 GO:0000160
Pte6g01943 180 SMART REC_2 63 175 IPR001789 GO:0000160
Pte6g01943 180 Pfam Response regulator receiver domain 66 174 IPR001789 GO:0000160
Pte6g01943 180 SUPERFAMILY CheY-like 64 176 IPR011006 -
Pte6g01943 180 Gene3D - 64 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01943 Pte-Chr6 35991843 35994688 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01943 41 169 Response Regulator Gene Family AT3G04280 30.534 2.20e-10 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte6g01943 Response_reg 1.1e-09 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01943 - - zju:107426640 92.8189