Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01918 ATGCCGCCGAAGCAGCAAGCGAAAGCAGATGTAGCAAAGAAGCAGAAGATCGTAGAGGACAAGACCTTCGGGCTCAAGAACAAAAACAAGAGCAAAAATGTCCAGAAGTACGTCCAGAACCTTAAGCAGTCAGTACAGCCCAAACCTGATCCTTCCAAAACCGCCGTCAAGAAAAAGAAGGAGGAAGAGAAGGCCAAAGAGAAGGAGCTGAATGAATTGTTTAAAGTTGCTATTAGTCAGCCGAAAGTCCCAGCTGGTGTTGATCCCAAGTCAATATTGTGTGAGTTTTTTAAAGCGGGACAATGTGCCAAAGGTTTCAAATGCAAGTTCTCTCACGATCTCAATGTTCAGAGGAAAGGAGAAAAGATTGATATCTACAGTGACAAGCGTGACCATGAAACAATGGAGGATTGGGATCAAGAGACGTTGGAGAAAGTGGTTGAATCGAAGAAATCTGAGTACAATCAAAACAAACCTACTGATATTGTGTGCAAACACTTTCTTGACGCTGTTGAGAAGAAGCAATATGGTTGGTTTTGGGACTGTCCTAATGGTGGTATAAACTGCCACTACCGCCATGCTCTGCCTCCAGGCTATGTTTTAAAATCACAGATGAAGGCTTTGTTAGAAGAAGAAGCTGATAAAATACCTGTTGAGGAAGAGATAGAAAATCAGCGAGCTAAATTGACAAGTTCAACCCCTATGACTCCTGAACTATTCTTGCTATGGAAGAAGAAGAAGATGGAAGAAAGAGATGCTGGTTTGGCTGCACTGAAGGCTGACAGGGCAAAGAATGACCGTCTGAGTGGGCGTGAGCTCTTCCTGTCAGATGCAAGTCTGTTTGTCGATGATGTTGGGGCATATGAAGAGTATGAGAGAGAGGATGAAGAACCTGATGTCAATGAGCAGAAGGGCAATGACAACCCAGCCAGAAATGGTGAGTCCACCTCAACTAAAGCTGGCGCTGATATGGAAGATGATCCAGATGACGACGACGATGATGAACTGGATGTGGATGAGTTAAATGAGTTGGAAGCAAGCTTATCGAGAGCATCAATTAAAATTCAAGAGCCTGGTGCTGATAATTGA 1089 0.438 MPPKQQAKADVAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQSVQPKPDPSKTAVKKKKEEEKAKEKELNELFKVAISQPKVPAGVDPKSILCEFFKAGQCAKGFKCKFSHDLNVQRKGEKIDIYSDKRDHETMEDWDQETLEKVVESKKSEYNQNKPTDIVCKHFLDAVEKKQYGWFWDCPNGGINCHYRHALPPGYVLKSQMKALLEEEADKIPVEEEIENQRAKLTSSTPMTPELFLLWKKKKMEERDAGLAALKADRAKNDRLSGRELFLSDASLFVDDVGAYEEYEREDEEPDVNEQKGNDNPARNGESTSTKAGADMEDDPDDDDDDELDVDELNELEASLSRASIKIQEPGADN* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01918 362 MobiDBLite consensus disorder prediction 40 63 - -
Pte6g01918 362 ProSiteProfiles Zinc finger C3H1-type profile. 88 115 IPR000571 GO:0046872
Pte6g01918 362 MobiDBLite consensus disorder prediction 305 319 - -
Pte6g01918 362 Gene3D - 205 279 - -
Pte6g01918 362 ProSiteProfiles Zinc finger C3H1-type profile. 158 196 IPR000571 GO:0046872
Pte6g01918 362 MobiDBLite consensus disorder prediction 290 337 - -
Pte6g01918 362 PANTHER ZINC FINGER-CONTAINING PROTEIN P48ZNF 1 359 - -
Pte6g01918 362 SUPERFAMILY CCCH zinc finger 88 113 IPR036855 GO:0046872
Pte6g01918 362 Pfam DRG Family Regulatory Proteins, Tma46 215 297 IPR032378 -
Pte6g01918 362 Gene3D - 87 204 - -
Pte6g01918 362 SMART c3hfinal6 158 195 IPR000571 GO:0046872
Pte6g01918 362 SMART c3hfinal6 88 114 IPR000571 GO:0046872
Pte6g01918 362 Coils Coil 53 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01918 Pte-Chr6 35867984 35870866 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pte6g01918 DFRP_C 5.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01918 - - rcu:8283836 555.444