Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01917 ATGAAGTCCAATAGCAATGCTTTCACTTCGATCTCAAAAGCAAATTCCAATCCTGATGGTTCAGGCAAGAAGATGAGGAAGCCTTACACGATCACCAAGTCTAGGGAGAGCTGGACTGAGGAAGAGCATGACAAATTCATTGAGGCTCTTCAACTATTCGACCGTGATTGGAAGAAAATTGAAGATTTTGTGGCTTCAAAAACAGTGATTCAGATCAGAAGCCATGCCCAGAAATACTTCTTGAGGGTCCAAAAGAATGGGACAGTAGCACATGTGCCACCTCCTCGTCCCAAGCGCAAGGCTACTCATCCATACCCACAAAAACAATCCAAAAATGTCTCGATGCAACTACCATTTTCGGCGGAATCACCCAAAGTCCATGTCCCTGCTTGTAATCCATGGGATGATGTTTCTCTGACGGCACCAAGGATGGGTAATTGCAATATTAGTGGCGTTCAAAGCTCAACTACAATGGATCCCGTTTATGAGATAACTAGCTCGGTGAAACAAGCTCCAGTTCTACATGCTACACCAGACTTTGCTGAGGTTTACAGCTTCATCGGAGGCATTTTTGATCCAGAGACAGAAGGTCACGCACAGAAATTAAAGGAAATGGACCCCATAAATTTTGAAGCAGTTCTGCTGCTAATGAAAAATCTTACCATCAATATGTCCAGCCCTGATTTTGAGCCAAATATACAAATTTTCTCATCTCATGACGTCAGTACCAAGAACGACAGAGTTGCTCCAGAAATTGATGTGAAGCAAACTGATGATCTATCATGTCAAACGAATTGA 798 0.4286 MKSNSNAFTSISKANSNPDGSGKKMRKPYTITKSRESWTEEEHDKFIEALQLFDRDWKKIEDFVASKTVIQIRSHAQKYFLRVQKNGTVAHVPPPRPKRKATHPYPQKQSKNVSMQLPFSAESPKVHVPACNPWDDVSLTAPRMGNCNISGVQSSTTMDPVYEITSSVKQAPVLHATPDFAEVYSFIGGIFDPETEGHAQKLKEMDPINFEAVLLLMKNLTINMSSPDFEPNIQIFSSHDVSTKNDRVAPEIDVKQTDDLSCQTN* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01917 265 PANTHER SWI/SNF COMPLEX-RELATED 6 225 - -
Pte6g01917 265 SUPERFAMILY Homeodomain-like 29 85 IPR009057 -
Pte6g01917 265 CDD SANT 37 80 IPR001005 -
Pte6g01917 265 ProSiteProfiles Myb-like domain profile. 30 80 IPR001005 -
Pte6g01917 265 SMART sant 34 82 IPR001005 -
Pte6g01917 265 Gene3D - 38 85 - -
Pte6g01917 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 84 IPR017930 -
Pte6g01917 265 NCBIfam myb-like DNA-binding domain, SHAQKYF class 33 82 IPR006447 GO:0003677
Pte6g01917 265 MobiDBLite consensus disorder prediction 1 19 - -
Pte6g01917 265 Pfam Myb-like DNA-binding domain 35 80 IPR001005 -
Pte6g01917 265 ProSiteProfiles SANT domain profile. 33 84 IPR017884 -
Pte6g01917 265 MobiDBLite consensus disorder prediction 1 38 - -
Pte6g01917 265 MobiDBLite consensus disorder prediction 88 110 - -
Pte6g01917 265 FunFam protein REVEILLE 6 isoform X1 37 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01917 Pte-Chr6 35863764 35865900 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte6g01917 Myb_DNA-binding 4.4e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01917 - - gmx:778050 334.724