Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01915 ATGTTGGATCTTAATCTCAACGTTGGTTCTACTGCTTCTAATTCTGGTTCTCCTGAAATGTTCACTGACAAGGTCTTTAATGTCTCTAGTAGCCAAATGGACAATACGAATTGCTCTGCCTCTGCAAGCTTCAATTCCTCTGTTTCAGTCGTCCATGCTGACACCTCCACCAACACTTGCGATGATGACTCTTGCTCTTATGGTGATGACGCTTTCGAGTATAACTTTGCCATTCTCAATCATAAGTCTGCCTCCCATTCTTTTGTTCCGCTTCACCATGGTGAAAAGCATCCACCTAAGCAACGGTCCTGCAATAAGCGCACCATCAAACTTTTTCCAGACGCCGGTGCCGAACAACCCAATGATGCTGTTGCTGGGTTCGCAGTGGAAGAATGCTTGGATCTTTCAAGCAAAAACGTCGATTATGGAGGAGCGGTGAAGCCAAAGATTTTGCTGCCCCATCAGCAGCAGCTGCAACCCAGACAGCAGGTGAAGAAGAGTCGAAGAGGACCAAGGTCTAGGAGCTCTCAGTACCGAGGTGTGACTTTTTATCGAAGAACTGGAAGATGGGAATCGCATATATGGGACTGTGGAAAACAAGTGTACTTGGGTAAGTCTGCAACCGCGTTAATACGGGATTCTCGTTTATGCTTGGAACTCGGTTTTAAATTTTTGAAACCGACTTTGGGTGGGTTCGACACTGCTCATGCTGCTGCTAGGGCATACGATCGAGCTGCTATAAAATTTCGTGGAATCGATGCCGATATTAATTTCAATATAAGCGATTATGATGAAGACATAAATCAGTTGAGTAACTTCACCAAGGAAGAATTTGTGCATCTACTTCGTCGCCAGAGTACTGGTTTCTCCAGAGGAAGCTCAAAATATAGGGGAGTCACATTGCACAAATGTGGGCGATGGGAAGCTCGAATGGGCCAGTTTCTGGGAAAGAAGTATATATATCTTGGACTTTTTGATAGCGAGATAGAAGCTGCAAGCAGGGCTTATGATAGGGCGGCTATGAAATGTAATGGCAGGGAAGCAGTTACAAACTTTGAGCCAAGCTTATATGAAGGAGAGGCTCTCACTGAAGCTTATAATCAAGATGCAGGGCAAATTCTTGATCTTAACTTGGCCATGGCTCCACCTTCCCTTTCTGACGGCCAAATGGGAAACACATTCAATGTGAATGGAATTTATTTTCAGCATGGCCAGGACGACATGCAACTCGATGCAAGTAGAATGTCTGCATCCACATCGCTGAAGGCACAGCCATGTCATGTGTCAATGGTTACTGGACCTCCTCCAACCTGGAGTTACACGAATTCTTTCTTTCCCAATTTTAAGGAAAGAGCCATGGAGAAGATGGATGGTAATTCCACGCCAAACTGGGCTTGGCAAGTCCAAGGTCCTTATGGTGTGTCAATTCCACATCATCAGGATTCCATAGTTCAACAAGAATTATACCTCCCGCGGACAGTCAACCATTCTTTCCAAATGCAAGCACCCTCCACCCCCATTTCCCATCCTCACTCTCAAGTTCTAGCCACATACCCTCTTTCTACTGCAGGACCTAAGAGCAGTATTCCCTCAAGAGACCAAAAGGAAAGAAATATAGGGTTCTATCCCAAAGTTCCGTAG 1641 0.4528 MLDLNLNVGSTASNSGSPEMFTDKVFNVSSSQMDNTNCSASASFNSSVSVVHADTSTNTCDDDSCSYGDDAFEYNFAILNHKSASHSFVPLHHGEKHPPKQRSCNKRTIKLFPDAGAEQPNDAVAGFAVEECLDLSSKNVDYGGAVKPKILLPHQQQLQPRQQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGKSATALIRDSRLCLELGFKFLKPTLGGFDTAHAAARAYDRAAIKFRGIDADINFNISDYDEDINQLSNFTKEEFVHLLRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAASRAYDRAAMKCNGREAVTNFEPSLYEGEALTEAYNQDAGQILDLNLAMAPPSLSDGQMGNTFNVNGIYFQHGQDDMQLDASRMSASTSLKAQPCHVSMVTGPPPTWSYTNSFFPNFKERAMEKMDGNSTPNWAWQVQGPYGVSIPHHQDSIVQQELYLPRTVNHSFQMQAPSTPISHPHSQVLATYPLSTAGPKSSIPSRDQKERNIGFYPKVP* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01915 546 MobiDBLite consensus disorder prediction 151 178 - -
Pte6g01915 546 Pfam AP2 domain 294 345 IPR001471 GO:0003700|GO:0006355
Pte6g01915 546 ProSiteProfiles AP2/ERF domain profile. 177 259 IPR001471 GO:0003700|GO:0006355
Pte6g01915 546 MobiDBLite consensus disorder prediction 520 546 - -
Pte6g01915 546 CDD AP2 294 355 IPR001471 GO:0003700|GO:0006355
Pte6g01915 546 ProSiteProfiles AP2/ERF domain profile. 295 353 IPR001471 GO:0003700|GO:0006355
Pte6g01915 546 SMART rav1_2 177 265 IPR001471 GO:0003700|GO:0006355
Pte6g01915 546 SMART rav1_2 295 359 IPR001471 GO:0003700|GO:0006355
Pte6g01915 546 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 131 379 - -
Pte6g01915 546 SUPERFAMILY DNA-binding domain 227 261 IPR016177 GO:0003677
Pte6g01915 546 Gene3D AP2/ERF domain 176 210 IPR036955 GO:0003700|GO:0006355
Pte6g01915 546 Gene3D AP2/ERF domain 294 354 IPR036955 GO:0003700|GO:0006355
Pte6g01915 546 Gene3D AP2/ERF domain 223 261 IPR036955 GO:0003700|GO:0006355
Pte6g01915 546 SUPERFAMILY DNA-binding domain 294 354 IPR016177 GO:0003677
Pte6g01915 546 PRINTS Ethylene responsive element binding protein signature 296 307 IPR001471 GO:0003700|GO:0006355
Pte6g01915 546 PRINTS Ethylene responsive element binding protein signature 335 355 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01915 Pte-Chr6 35855255 35858083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01915 158 381 AP2-EREBP Transcription Factor Family AT4G36920 68.444 1.61e-85 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte6g01915 AP2 6.7e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01915 K09284 - qsa:O6P43_006713 488.419