Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01912 ATGGCCGACGCTCCGACAAGTCCCGGTGGTGGTAGTCACGAGAGCGGTGAGCACAGCCCACGCTCTAACGTTCGTGAGCAAGACAGGTACCTTCCGATTGCCAACATCAGTAGGATCATGAAGAAGGCGCTACCTGCTAATGGAAAAATAGCCAAGGATGCTAAGGAGACCGTGCAGGAATGTGTCTCTGAGTTCATCAGTTTCATCACTAGCGAGGCTAGTGATAAGTGTCAGAGAGAGAAGAGAAAGACGATTAATGGTGATGATTTGCTGTGGGCGATGGCTACTTTGGGGTTTGAAGATTACATCGATCCCCTCAAAATTTACCTTACCAGATACCGAGAGGGTGACACCAAGGGTTCGGCTAAAAATGGAGATACATCTTCTAAGAAGGATGCTCAATCAATCAATCCACAGGGTGTTAATTATACAAATTCTCAATCTCAGGCCCAACATTTGGTTCTCCCGATGCAAGAAAGAGAGTAG 486 0.4712 MADAPTSPGGGSHESGEHSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREGDTKGSAKNGDTSSKKDAQSINPQGVNYTNSQSQAQHLVLPMQERE* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01912 161 MobiDBLite consensus disorder prediction 127 154 - -
Pte6g01912 161 FunFam Nuclear transcription factor Y subunit B-3 19 143 - -
Pte6g01912 161 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 15 148 IPR027113 GO:0001228|GO:0006355|GO:0016602
Pte6g01912 161 MobiDBLite consensus disorder prediction 117 161 - -
Pte6g01912 161 ProSitePatterns NF-YB/HAP3 subunit signature. 61 77 IPR003956 GO:0005634|GO:0006355|GO:0043565
Pte6g01912 161 MobiDBLite consensus disorder prediction 1 28 - -
Pte6g01912 161 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 94 IPR003958 -
Pte6g01912 161 Gene3D Histone, subunit A 16 155 IPR009072 GO:0046982
Pte6g01912 161 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Pte6g01912 161 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
Pte6g01912 161 PRINTS CCAAT-binding transcription factor subunit A signature 58 76 - -
Pte6g01912 161 SUPERFAMILY Histone-fold 27 130 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01912 Pte-Chr6 35826477 35830147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01912 7 157 CCAAT-HAP3 Transcription Factor Family AT2G37060 75.000 2.76e-80 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Pte6g01912 CBFD_NFYB_HMF 9.8e-28 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01912 K08065 - csv:101212699 270.011