Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01906 ATGGGGAGGAAGGCGAATTGGTTTTCATCGGTGAAGAAAGCCCTCAGCCCGGAACCAAGGGAGAAAACAGACCAGAAATCAAATAAGTCTAAGAAAAGATGGTTCGGGAAGCATAAGTTACCGGCTTCAGATTCTTCATTTGAAGCTGTGACTGCTCCTCCGCCGCAGGCTCCTGCTCCCTCCTTGCCAGAAGAACCAGAGGTGATTCATGTTCAAAATGAAAGCAGCAGTGCTCAAAATGTTGCAGTTGTTGCCCCTGCTTATGTCGAGAAAGTTATTTCTTCTGCACTAGCAGTTCCTGTAGCAGCTGAAACTAAAATCCCCAAATATGTGGGCAAGACCGATGAAGAGGTAGCTGCAATCAAGATTCAGACAGCTTTCAGGGGATATTTGGCTAGGAGGGCATTGCGCGCTTTGAGAGGGCTTGTTAGGCTCAAGTCGCTGATGGAAGGCCCGCTAGTGAGACGCCAAGCCATCAGTACCCTTAAGTCCATGCAGACTTTAGCTCGTGTACAATCTCAGATACATTCCAGAAGGATCAGGATGCTTGAGGAGAACCAAGCTCTACAGAAGCAACTATTACAAAAACATGCAAAAGAGCTCGAGAGTATGCGGATCGAAGAGGAATGGGACGACAGCTTGCAGTCAAAGGAACAAATTGAAGCAAAGTTATTCAACAAATATGCTGCTGCTATGAGAAGAGAAAGATCTTTGGCTTATGCATTCTCTCATCAGCAAAACGGAAAGAATTCATCTAGATCAGTGAACCCCATGTTTATGGATCCAACCAATCCTAGCTGGGGTTGGAGCTGGTTGGAACGATGGATGGCAGCTAGGCCATGGGAGGGTCGTAAAATAGACCAAGAACTGAACAATGATAACTCATCTGTAAAGAGTGCGAGCCACAACAGTACTGGAGGAGAAATCAGCAAGTCTTACGCTCGCTATCAACTCAATTCTGATATATTTTCTCCATCATCAAGTCAAAATCAAACCTCTCCTCACGTCCAGCCTCATTCAGCTCCTCCAAAAGCAGTCACTGGATTAGTTTCCAGAAAGCTGAAGTCAGCAAGCCCAAAGGACAGCTTACTTTCAGAGGATGATTCTAAGAGTGTGGTGAGCATGAAGTCAGAACGATACCGGAGGCATTCCGTTGGAGGGACATCTGTCAGAGATGATGATAGCCTTGTAGGTTATCCATCAATTCCCAGTTACATGGTTCCAACTCAGTCTGCAAAAGCAAAATCAAGAATGCAGAGTCCATTGGCCACAGAAAATGGAACTACAGAGAACAGCTCAGTTGGAACTGCAAAGAAACGTCTCTCTTTCCCTCCTTCACCAGCCAGGCCGAGGCGCCATCCAGTTCCATCAAAATTAGAGAGCAGCTTAAATTCTGAAATAAGTGTGGGCAATGGAGTTGGCCATTGA 1428 0.4601 MGRKANWFSSVKKALSPEPREKTDQKSNKSKKRWFGKHKLPASDSSFEAVTAPPPQAPAPSLPEEPEVIHVQNESSSAQNVAVVAPAYVEKVISSALAVPVAAETKIPKYVGKTDEEVAAIKIQTAFRGYLARRALRALRGLVRLKSLMEGPLVRRQAISTLKSMQTLARVQSQIHSRRIRMLEENQALQKQLLQKHAKELESMRIEEEWDDSLQSKEQIEAKLFNKYAAAMRRERSLAYAFSHQQNGKNSSRSVNPMFMDPTNPSWGWSWLERWMAARPWEGRKIDQELNNDNSSVKSASHNSTGGEISKSYARYQLNSDIFSPSSSQNQTSPHVQPHSAPPKAVTGLVSRKLKSASPKDSLLSEDDSKSVVSMKSERYRRHSVGGTSVRDDDSLVGYPSIPSYMVPTQSAKAKSRMQSPLATENGTTENSSVGTAKKRLSFPPSPARPRRHPVPSKLESSLNSEISVGNGVGH* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01906 475 SMART iq_5 115 137 IPR000048 GO:0005515
Pte6g01906 475 MobiDBLite consensus disorder prediction 1 63 - -
Pte6g01906 475 MobiDBLite consensus disorder prediction 359 389 - -
Pte6g01906 475 MobiDBLite consensus disorder prediction 15 30 - -
Pte6g01906 475 Gene3D iswi atpase 113 140 - -
Pte6g01906 475 ProSiteProfiles IQ motif profile. 116 144 IPR000048 GO:0005515
Pte6g01906 475 PANTHER IQ-DOMAIN 5-RELATED 1 446 - -
Pte6g01906 475 Pfam IQ calmodulin-binding motif 119 137 IPR000048 GO:0005515
Pte6g01906 475 MobiDBLite consensus disorder prediction 322 475 - -
Pte6g01906 475 MobiDBLite consensus disorder prediction 404 439 - -
Pte6g01906 475 Pfam Protein of unknown function (DUF4005) 399 447 IPR025064 -
Pte6g01906 475 MobiDBLite consensus disorder prediction 322 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01906 Pte-Chr6 35798740 35802263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01906 1 476 IQD Protein Family AT5G03040 49.899 3.66e-137 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01906 - - gmx:100799058 541.191