Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01898 ATGGGCCATGGAGCCAATTTCCAGTCCAGCTTGGTGGCTGATATTGCTCGAGTCCCAGATGGAACGCCTGGTAATGCTGCTGAGTTGTTTGAGAGGGTTTCGAAAAGTATTAAAATGAAACGTTATAATGAGGCACTTGACGATCTCAGTACTGCTATAGAGTCCGATCCAAGCCTTTCAGAAGCATATCTACGTCGTGCTTCAATTCTTCGACAGTTATGCAGATATGAGGAATCTGAAAGGAGCTACACAAAATTTTTGGGGTTAAAATCAGGAAATTCAGCAGCAAGAAAGGAGCTTTCTCAAATGTCACAAGCTCAGAGTTCCTTAGAAACAGCACTCTCTCTCTTTGAGACGGGCAACTTTACAAAATCCTTGGAATTCGCGGACAAAATTGTGCTTGTGTTTTCTCCTGCTTGTTCAAGGGCAAGGCTCTTGAAAGTGAGGTTGTTAATAGCTGAGAAAGAGTATTCTGGAGCAATTTCTGAGTCTGGCTATATACTCAAGGAAGATGAGAGCAATTTAGAGGCATTGTTGCTCAGAGGTCGGGCCTACTACTACTTAGCTGATCATGATGTTGCCATGAGGCATTACCAGAAAGGTCTTCGCCTTGACCCAGAGCATGCTGAACTGAAGAAAGCATATTTTGGATTAAAAAATTTGCTGAAGAAGAGCAAAAGTGCAGAAGATAATGTGAATAAGGGTAAGCTCAGAGTTGCAGTTGAAGAATATAAAGCAGCTCTTGCAGTGGACCCTATTCATAATGCACATAATGTTCATCTTCATCTTGGTTTATGTAAAGTATTAGTCAAGCTTGGTAGGGGAAAAGATGCTTTGGATAGTCGCAGTGATCCACTTACTATTGATCTAGAGTTAATTGAAGCTTTGGTTCAGCGGGGAGAAGCCAAACTCTTAACTGAGGATTGGGACGGTGCTGTTGAAGATCTAAAATATGCACAACAGAAGTCACCTCAGGATATGAATATTAGGGAGGCATTAACGAGAGCAGAGAAAGCTTTAAAGATGAGCAAACGAAAAGATTGGTACAAGATCTTGGGAGTTTCAAAAATGGCTTCAATATCAGAGATAAAACGAGCCTACAAGAAGCTTGCTTTGCAATGGCACCCAGATAAGAACGTGGAAAATAGAGAAGAAGCAGAGGCCCAATTCCGAGAAATTGCTGCTGCATATGAGGTTCTTAGTAATGAAGAGAAGCGCTCAAGATATGACCGAGGGGAAGACCTTGAAGACATGGGAATGGGTGGAGGAGGAGGTTTCAATCCATTTGGCGGTGGTGGGCAGGAGTTTACATTTACTTTTGATGGGGGATTTCCCGGTGGTTTTGGAGGGGGGGGAGGCTTCCCAGGAGGGTTTGGAGGGGGCTTTCCAGGGGGGGGCGGTTTTGAGTTCCATTTTTGA 1419 0.4355 MGHGANFQSSLVADIARVPDGTPGNAAELFERVSKSIKMKRYNEALDDLSTAIESDPSLSEAYLRRASILRQLCRYEESERSYTKFLGLKSGNSAARKELSQMSQAQSSLETALSLFETGNFTKSLEFADKIVLVFSPACSRARLLKVRLLIAEKEYSGAISESGYILKEDESNLEALLLRGRAYYYLADHDVAMRHYQKGLRLDPEHAELKKAYFGLKNLLKKSKSAEDNVNKGKLRVAVEEYKAALAVDPIHNAHNVHLHLGLCKVLVKLGRGKDALDSRSDPLTIDLELIEALVQRGEAKLLTEDWDGAVEDLKYAQQKSPQDMNIREALTRAEKALKMSKRKDWYKILGVSKMASISEIKRAYKKLALQWHPDKNVENREEAEAQFREIAAAYEVLSNEEKRSRYDRGEDLEDMGMGGGGGFNPFGGGGQEFTFTFDGGFPGGFGGGGGFPGGFGGGFPGGGGFEFHF* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01898 472 FunFam DnaJ domain containing protein 14 344 - -
Pte6g01898 472 Pfam Tetratricopeptide repeat 38 90 - -
Pte6g01898 472 ProSitePatterns Nt-dnaJ domain signature. 390 409 IPR018253 -
Pte6g01898 472 Coils Coil 383 403 - -
Pte6g01898 472 Gene3D DnaJ domain 343 423 IPR036869 -
Pte6g01898 472 ProSiteProfiles TPR repeat profile. 175 208 IPR019734 GO:0005515
Pte6g01898 472 FunFam DnaJ subfamily C member 7 345 453 - -
Pte6g01898 472 PRINTS DnaJ domain signature 367 382 IPR001623 -
Pte6g01898 472 PRINTS DnaJ domain signature 349 367 IPR001623 -
Pte6g01898 472 PRINTS DnaJ domain signature 405 424 IPR001623 -
Pte6g01898 472 PRINTS DnaJ domain signature 385 405 IPR001623 -
Pte6g01898 472 Pfam DnaJ domain 347 410 IPR001623 -
Pte6g01898 472 SMART tpr_5 26 59 IPR019734 GO:0005515
Pte6g01898 472 SMART tpr_5 293 326 IPR019734 GO:0005515
Pte6g01898 472 SMART tpr_5 175 208 IPR019734 GO:0005515
Pte6g01898 472 SMART tpr_5 60 93 IPR019734 GO:0005515
Pte6g01898 472 Pfam Tetratricopeptide repeat 176 208 IPR013105 -
Pte6g01898 472 SUPERFAMILY Chaperone J-domain 340 450 IPR036869 -
Pte6g01898 472 SUPERFAMILY TPR-like 37 342 IPR011990 GO:0005515
Pte6g01898 472 ProSiteProfiles dnaJ domain profile. 347 413 IPR001623 -
Pte6g01898 472 PANTHER DNAJ PROTEIN P58IPK HOMOLOG 14 472 IPR044620 -
Pte6g01898 472 CDD DnaJ 347 402 IPR001623 -
Pte6g01898 472 Gene3D Tetratricopeptide repeat domain 12 342 IPR011990 GO:0005515
Pte6g01898 472 SMART dnaj_3 346 405 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01898 Pte-Chr6 35746548 35751157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01898 343 410 C2H2 Transcription Factor Family AT1G74250 45.833 5.79e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01898 K09523 - qsa:O6P43_006678 646.736