Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01894 ATGAAGGCTGCTTGTTCTATTTTTACTTGTTTCTCATCAGCATCATCATCCGTTAACGAACAAAGCAGGAACGATGAGCAAACTTACGGAAGATTTCGTGTGTTCTCTTACAACGAACTGAAATTTGCCACAAAAGATTTCCATATCTCTAATAAAATTGGAAAAGGGGGGTTTGGCTCTGTCTACAAGGGTCAGCTCAGGGATGGCACACTTGTTGCTGTAAAAGTTTTGTCAATCGAGCTAGATTCCATGCGAGGGGAGAGGGAATTCATAGCCGAATTAGCTTCACTCTCTGATCTCAACCATGAAAATCTGGTCACTCTCCGAGGTTGTTGTGTGGAACCATCCACTCGATATTTAGTCTATGAATACATGGAAAACAACAGCGTTTCACAAACATTTTTAGGTGGAGAGGTCAACAGGGCGAAATTCACGTGGGATAGAAGACGGGAAGTATTGATGGGGGTTGCTCGTGGATTAGTGTATCTTCATGGGGGAGTTACCCCATATATTTTGCATAGAGATATCAAAGCCAGCAATATACTTCTTGACAGAGATTTTACCCCGAAGGTTTCAGATTTTGGTCTTGCCAAGTTACTGAGAGATGAAAATTCTCACGTTAGTACTCGCGTCGCGGGAACATTCGGCTATCTTGCTCCAGAATACGCAGTCACTGGACGATTGACACGAAAATCAGATGTATATAGCTTTGGAGTGCTAGTCCTACAGGTTGTCACTGGCCAACCCGTCGTGGATGTGGATGATGAACACAAAGAATGTTTCCTTGTAGAGAAGGCATGGTCAGCTTATGAGTCTGGTAATCTTATAGAAGTAGTAGATCCTGTGCTTAACATGGAATTTCCAGAGGAAGAAGCTCTAAGGTTCTTAAAGCTGGGCCTACTTTGTGTGCAAGAAACCAGCAACCTACGGCCAAAAATGTCAATGGCCGTGGAGATGTTGAGTACTATATTCAATATGCAAGATATTGTGATTACAAAACCTGGAACTGATGATTTTATGAAAAGAAAAATGGGCCAGATGAGGCCTCCACAAAGACATCAGGAATCAAGCTCCACTGAAGTAAATTACTCATCAAGCTTTTGGAGTTCAGCCAATACTGGGCGTTAA 1128 0.4246 MKAACSIFTCFSSASSSVNEQSRNDEQTYGRFRVFSYNELKFATKDFHISNKIGKGGFGSVYKGQLRDGTLVAVKVLSIELDSMRGEREFIAELASLSDLNHENLVTLRGCCVEPSTRYLVYEYMENNSVSQTFLGGEVNRAKFTWDRRREVLMGVARGLVYLHGGVTPYILHRDIKASNILLDRDFTPKVSDFGLAKLLRDENSHVSTRVAGTFGYLAPEYAVTGRLTRKSDVYSFGVLVLQVVTGQPVVDVDDEHKECFLVEKAWSAYESGNLIEVVDPVLNMEFPEEEALRFLKLGLLCVQETSNLRPKMSMAVEMLSTIFNMQDIVITKPGTDDFMKRKMGQMRPPQRHQESSSTEVNYSSSFWSSANTGR* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01894 375 MobiDBLite consensus disorder prediction 342 375 - -
Pte6g01894 375 Pfam Protein kinase domain 47 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01894 375 MobiDBLite consensus disorder prediction 350 375 - -
Pte6g01894 375 ProSiteProfiles Protein kinase domain profile. 47 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01894 375 Gene3D Transferase(Phosphotransferase) domain 1 125 339 - -
Pte6g01894 375 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 32 366 - -
Pte6g01894 375 SUPERFAMILY Protein kinase-like (PK-like) 29 334 IPR011009 -
Pte6g01894 375 FunFam Serine/threonine-protein kinase receptor 17 124 - -
Pte6g01894 375 SMART serkin_6 47 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01894 375 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Pte6g01894 375 FunFam Cysteine-rich receptor-like protein kinase 2 125 327 - -
Pte6g01894 375 CDD STKc_IRAK 53 320 - -
Pte6g01894 375 Gene3D Phosphorylase Kinase; domain 1 17 124 - -
Pte6g01894 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01894 Pte-Chr6 35731680 35734272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01894 35 335 Receptor kinase-like Gene Family AT1G56120 50.831 3.04e-92 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte6g01894 Pkinase 6.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01894 - - qsa:O6P43_006672 486.108