Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01893 ATGGCTTCAAATAGGAGTCAAGGTGGAATCCAGCAGTTGCTAGCTGCTGAACAAGAAGCGCAACGCATAGTTACTGCCGCTAGAAATGAGAAAATGGCTAGACTGAAACAGGCCAAAGAGGAGGCAGAAAAGGAGGTTGCCGAGTTTCGAGCACAAATAGAAGCACAGTATCAAAAGAAACTTGCAGACGCTAGTGGAGGTTCAAGTGCAAACGTTATGCAGCTTGAAATGGAAACAGAGCAAAAGATAGAGCATTTGAAAAGCGAATCAGGAAGAATATCGGAAGCTGTTGTTGGCATGCTTCTCAAGCATGTGACAACTGTAAGGAACTAA 333 0.4414 MASNRSQGGIQQLLAAEQEAQRIVTAARNEKMARLKQAKEEAEKEVAEFRAQIEAQYQKKLADASGGSSANVMQLEMETEQKIEHLKSESGRISEAVVGMLLKHVTTVRN* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01893 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
Pte6g01893 110 Pfam Vacuolar (H+)-ATPase G subunit 6 108 IPR005124 GO:0016471|GO:0046961|GO:1902600
Pte6g01893 110 Coils Coil 10 59 - -
Pte6g01893 110 NCBIfam V-type ATPase subunit G 2 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Pte6g01893 110 Gene3D - 1 110 - -
Pte6g01893 110 FunFam V-type proton ATPase subunit G 3 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01893 Pte-Chr6 35727995 35730803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01893 1 111 Primary Pumps ATPases(2) AT3G01390 69.369 1.47e-38 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01893 K02152 - gmx:100499803 145.206