Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01891 ATGATTACGTTTATGGATTCAAATGAGAAATTGAAAGAGGTGGAAACATGCTTAGACCCTCAATTCTGGCATGCATGTGCTGGTGGCATGGTGCATTTGCCGCAACTTAACGCCTCTGTCTTCTACTTTCCTCAGGGCCATGCTGAGCATGCGTCCGGACCAGTTGATTTCAGGAATTGCTCCAGCCTTCCTCCCTATATTCCTTGTAGAGTCTCTGCTCTCAAGTACATGGCTGATACTGATACTGATGAGGTCTATGCTAAACTTAGGCTTGTGCCTGTGAAAGGAAACGAACCTGATTATGAAGATGATGGGATGGATGGGGTTAATGCCTCCGAGAACCCGGAAAAACCTGCTTCGTTCGCTAAGACGTTGACTCAATCTGATGCAAATAATGGAGGAGGTTTCTCTGTACCCAGTATGCCATATGGAAGATTTTCTGCATTTTTGAGTGATGAAAACAAGCTAATGAGAAATGAAAATGGCAATGGTCTAAGCTCGAATGGGGGTTCCATGGGCAGAGGGAAAGTCAGGCCTTATGCAGTTACTGAAGCTGCAACACTCGCTGCTAAAGGACAGCCATTTGAGGTTGTTTACTATCCCCGAGCTAGTACTCCTGAGTTTTGTGTGAAGGCCTCATTGGTTAAAGCAGCATTAAAGATTCAGTGGTGCTCTGAAATGAGGTTCAGAATGCCCTTTGAAACAGAGGACTCCTTGCGGGTTAGTTGGTTTTCGGGAACTATATTATCAGTTCAGGTTGCCGATCCCGTTCACTGGCCAGATTCGCCTTGGAGGCTTCTCCAGGTTGCATGGGATGAGCCAGATTTCATTCAAAATGTAAAACGAGTTAGCCCATGGCTGGTGGAATTGGTACCCAACATGCCTCCCATCCACCAACTTTCCCCTTTCTCACCTCCAAGGAAGAAGATGAGAGTGTCACCACATTCAGACTTTCCCCTTGATGGACAAATTCCACTTCCACCATTTTCAACCAATCTTATCAGTACCAATGGCCCTTTCAGTTGTTTCCCCAATAGTTCTCCTGCTGGCATGCAGGGAGCCAGGCATTCTCATTATGGTCTATCTTTACCAGAACATCACCTCAATAAAATACAGTCAGCTATGTTTCCAACCAGTTTCCCAATGCTCGATCATGCTGCTATGACAAGGGTCTCTAATTGGCCGACCATGCAAAAGCCTGTCATGAAAGAGAATTCATCTTGCTTATTGACCATACCCAATTCAAGTCAGACTTCAAAAAAGTTTGATAATGTGAAGGCACCTCAGCTTATGCTTTTTGGTCAACCTATACTTACCGAGCAGCAGATATCTCTCAGCTGTTCTGGAGATGCAGTGACACCAGTTCTTAATGGCAATAGTTCATCTGACAGGAATACCTTGAAAATCACAAAATTTACTGATGGAAACAGACTTGCTCTTGGTCAACATGGTGGACAAGAACGGTCACGTTGTGAAGTATTTCTTTGGTACAAGGGTAATCGAGAAACTGAACCCTATCTGGGGTCAGATCACTGCAAGGTTTTCATGGAATCAGAAGAAGTAGGCCGCACCCTCGACTTGTCACTGCTTGGATCATATGAAGAATTGTATAGAAAGCTAGAAGACATGTTTGGAATAAAAAATTCTGGGATGCTAAATCATGTGCTCTATCGTGATCTAACCGGGGCCGTCAAACACATTGGTGATGAACCGTTCAGTGATTTCTTGAAAACAGCCAGGAGGTTGACAATTCTAATGTAA 1761 0.4435 MITFMDSNEKLKEVETCLDPQFWHACAGGMVHLPQLNASVFYFPQGHAEHASGPVDFRNCSSLPPYIPCRVSALKYMADTDTDEVYAKLRLVPVKGNEPDYEDDGMDGVNASENPEKPASFAKTLTQSDANNGGGFSVPSMPYGRFSAFLSDENKLMRNENGNGLSSNGGSMGRGKVRPYAVTEAATLAAKGQPFEVVYYPRASTPEFCVKASLVKAALKIQWCSEMRFRMPFETEDSLRVSWFSGTILSVQVADPVHWPDSPWRLLQVAWDEPDFIQNVKRVSPWLVELVPNMPPIHQLSPFSPPRKKMRVSPHSDFPLDGQIPLPPFSTNLISTNGPFSCFPNSSPAGMQGARHSHYGLSLPEHHLNKIQSAMFPTSFPMLDHAAMTRVSNWPTMQKPVMKENSSCLLTIPNSSQTSKKFDNVKAPQLMLFGQPILTEQQISLSCSGDAVTPVLNGNSSSDRNTLKITKFTDGNRLALGQHGGQERSRCEVFLWYKGNRETEPYLGSDHCKVFMESEEVGRTLDLSLLGSYEELYRKLEDMFGIKNSGMLNHVLYRDLTGAVKHIGDEPFSDFLKTARRLTILM* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01891 586 MobiDBLite consensus disorder prediction 97 117 - -
Pte6g01891 586 FunFam Auxin response factor 223 296 - -
Pte6g01891 586 ProSiteProfiles PB1 domain profile. 509 586 IPR000270 GO:0005515
Pte6g01891 586 Pfam Auxin response factor 185 268 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Pte6g01891 586 Gene3D - 223 294 - -
Pte6g01891 586 Gene3D - 508 586 - -
Pte6g01891 586 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 182 585 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01891 Pte-Chr6 35715295 35718520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01891 132 585 B3 DNA Binding Superfamily AT4G30080 47.174 1.36e-118 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01891 - - qsa:O6P43_006663 629.787