Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01884 ATGAACAGCTTGAAGGGCAACTGTCTCAAAGCATGCCTTAACAAGTGGAGGAAGATGGGTAGTAGAGCTATACTTAGTGCGGCTGGTGCTGAGTGCTGCTGCTGTCAATGGACCTTAAGCTCTTCCATGCATGACGAAAGCTGCATTCCCAAAGATGTACCAAAGGGCCATTTGGTTGTTTATGTAGGCGAGAACCACAAGAGATTTGTGATCAAGGTCACATTACTCAATCACCCACTATTTAGATCACTGCTAGACCAAGCTCAGGAAGAATATGACTTCACAGCAGATTCCAAACTCTGTATTCCTTGCAACGAGAGCCTTTTCCTTAATGTTGTTCGCTGCGCGAGTTCTCCACAGAGTTGA 366 0.4563 MNSLKGNCLKACLNKWRKMGSRAILSAAGAECCCCQWTLSSSMHDESCIPKDVPKGHLVVYVGENHKRFVIKVTLLNHPLFRSLLDQAQEEYDFTADSKLCIPCNESLFLNVVRCASSPQS* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01884 121 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 36 111 IPR003676 GO:0009733
Pte6g01884 121 Pfam Auxin responsive protein 37 114 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01884 Pte-Chr6 35676565 35676930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01884 36 121 Calmodulin-binding Proteins AT4G34750 45.055 1.94e-22 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01884 K14488 - qsu:112025259 179.874