Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01883 ATGGATATAAGATTCCTTGAGGTTCAAGCTATGACAATGAATGGAATGATGATAAAGGCCTCCAGGGGCTTCGTTATTAAATTTTTCGTTTTGGTTTCGTTATGCCTGTTCCTATGTGTTCACTGTGAGGATACGGATGCTAAAAAGTTGTACAGCCAACTTACTGATCTCACAAAAGTTTTCACCACAGACGTCAAGAACAGACTGGGCTTCTGCGTAGAGGATGCGAATTCTGATTGGGATGCGGCCTTTAACTTTGAAGGCAATCTGAAATTCTTAACTAATTGTATGAAGGACACCGAAGGAGATGTCACGCCGAGATTATGTACAGCAGCCGAAATCAGGTTCTATTTCGACAGTGTCCTCGAGACCGGGCTAACAACAAATATTTACCTAAAACCTAACAAGAATTGTAACCTGACTTCGTGGGTTTCTGGATGCGAACCTGGATGGGGCTGTAGCTTAGACTCAAAAGACAATATCGATCTCAAGAATGGGAAGGACATACCTCATAGGACGCAAGACTGCAAGCCTTGTTGCGAGGGGTTCTTTTGCCCTCAGGGTATAACTTGCATGATACCTTGCCCACTGGGCTCCTACTGTCCGCTTGCCAAACTTAATAAACAAACTGGAATATGTGACCCATACAATTACCAAATACCTCCTGGAAATGACAACCACACCTGTGGTGGTGCTGATATTTGGTCTGATGTTAAGAACAGTAGCTTTTTCTGTACTCCTGGATCATACTGCCCTGATACCATCACTAAAAATGGTTGCAGTCGTGGACACTATTGCAGAATGGGCTCAACTGATCAATTGGCATGCTTCCATTTGGCTCAATGTAACGCGAACACAGAAAACCAAAAGATTCATGCTTATGGTATCATCTTTATTGGTGTATTGAGTACAATACTGGTCATTATTTATAATTGTTCAGATCAAGTACTCCATACTCGGGAAAAAAGGCAAGCTAAATCAAGGGAAGCCGCAGCGAGGCATGTCAGAGAAACTGCACAAGCTCGTGAAAGGTGGAAATTAGCAAAAGATGCTGCTAAAAAGCGTGGATTTGGTTTGCAGGAGCAGCTCTCCCGTACCTTCTCTCGCAGAAAATCTACGAAGCAACCTGAACCATTGACGGGAAGCGGTCCCGTTAAAGCAGGACCTGATGAAGCTCTATTAGGAGCCACGCTTTCTGAGTCATCCTCTGCAGATTCAAAGGGAAAGAAAAAGGAACGTAGCAATCTTACCAAAATGTTACATGCCATGGAAAATGATCCACACGGCAATACTGGTTTAAATCTGCAGATTGGAGATAAAAACATTAAGAAACAAGTGCCTAAGGGAAAACAATTGCACACTCAAAGCCAGATATTTAAATATGCATACGGTCAAATTGAGAAGGAGAAGGCGATGCAAGAGAAAAACAAGGGCCTGACATTCTCTGGAGTAATTTCAATGGCCACTGATGGTGAAGTCAGAACTAGGCCTCCTATTGAGATTTCTTTCAAAGATCTGACACTCACTCTGAAAGGGAAAAACAAGAATCTTTTGAGAACCCTCACTGGGAAACTCATGCCAGGCCGAGTCTCGGCTGTCATGGGTCCATCCGGTGCTGGAAAAACAACATTTCTCACTGCTTTGGCTGGTAAAGTAACTGGATGCTCCATCAAAGGTTCAGTTCTCATAAATGGCAAAAATGAATCCATACACTCATACAAAAAAATTATTGGGTTTGTGCCACAAGATGATATTGTCCACGGGAATTTAACAGTAGAGGAAAATCTTCGTTTCAGCGCAAGATGCAGACTACCAGCTGATATGCCAAAACCAGATAAGGTTCTTGTTGTAGAAAGAGTAATCGAGTCCTTGGGACTACAGGCAGTAAGGGACTCATTAGTTGGGACAGTAGAAAAGAGAGGCATATCTGGAGGGCAGAGGAAACGTGTAAATGTTGGATTAGAGATGGTGATAGAACCTTCATTACTGTTTTTAGATGAACCTACAACTGGTTTAGACAGTACATCTTCCAATCTACTGCTCAAAGCACTTCGTCGTGAAGCTCTTGAAGGAGTAAACGTCTGCATGGTACTTCATCAACCAAGCTACACATTGTTTAGGATGTTCGATGATTTAATACTCTTAGGTAAAGGTGGTCTCACTGTATACCATGGACCTGTTAAAAAAGTAGAAGAGTATTTTTCTGGAGTTGGAATTAATGTGCCAGAGCGAGTTAACCCTCCAGATCATTTGATTGACGTTCTTGAGGGGATGGTGAGTCCAGACGGCGATGTATCTGTTGCACAGCTTCCCGTCAGATGGATGCTACATAATGGTTACTCCGTACCTCCAGATATGCTTCATCATGCATCTTCGTCTGCATCAACAAGTGAAGAATCAAACGAACACTCTTTTGCTGAAGATTTATGGGCAGATGTGAAGTTGAATGCGGAGACGAAGAAAGATCATCTACAATACAATTTTTTACATCCCAAGGACTTGTCAAATCGAACTACTCCTGGTATAGCCCGTCAGTACAGATACTTCCTTGGGAGGGTCACAAAGCAGAGGCTTCGAGAATCTAAAACACAAGCTGTTGATTATATCATTTTATTGCTTGCGGGTGCTTGCTTAGGAACTCTGGCTAAAGTGGACGATGCCACTTTTGGGTCCCGTGGCTACAGTTATACAGTTATTGCTGTTTCCCTACTCTGCAAGATAGCAGCTTTGAGATCGTTTTCTCTAGACAAATTAGAATACTGGAGAGAAAAGGCATCTGGAATCAGCAGTCTAGCTCATTTCCTCTCCAAGGATACAGTTGATAGTTTCAACACAATTGTAAAGCCATTGGTGTATCTTTCTATGTTTTATTTTTTCAATAATCCAAGATCAAGTTTTGGAGATAATTATCTTGTTTTGATATGCCTCGTCTATTGTGTGACTGGCATGGCTTATATATTGGCAATTTACCTTGATCCTGGCCCTGCACAACTGTGGTCAGTGCTTGTTCCAGTTGTATTAACACTCGTCGCAAACCAGGAAAAAGATAGTTTCTTTGTCAAGTATTTTGGAGCCCTTTGCTACACAAAATGGGCTATGGAGGCCTTTACCATTTCAAATGCTAGAAGGTACTCTGGGGTGTGGCTTATATCTCGCTGTGGCTATCTAATGCAAATGGGCTATGACCTTAAGGAATGGTTTCCTTGTCTAATAATTCTCATTCTATACGGTGTAGCCAGCCGTATGATAGCTTACGCTTTTCTAGTAAAATCCAGGAAGAAATGA 3285 0.4213 MDIRFLEVQAMTMNGMMIKASRGFVIKFFVLVSLCLFLCVHCEDTDAKKLYSQLTDLTKVFTTDVKNRLGFCVEDANSDWDAAFNFEGNLKFLTNCMKDTEGDVTPRLCTAAEIRFYFDSVLETGLTTNIYLKPNKNCNLTSWVSGCEPGWGCSLDSKDNIDLKNGKDIPHRTQDCKPCCEGFFCPQGITCMIPCPLGSYCPLAKLNKQTGICDPYNYQIPPGNDNHTCGGADIWSDVKNSSFFCTPGSYCPDTITKNGCSRGHYCRMGSTDQLACFHLAQCNANTENQKIHAYGIIFIGVLSTILVIIYNCSDQVLHTREKRQAKSREAAARHVRETAQARERWKLAKDAAKKRGFGLQEQLSRTFSRRKSTKQPEPLTGSGPVKAGPDEALLGATLSESSSADSKGKKKERSNLTKMLHAMENDPHGNTGLNLQIGDKNIKKQVPKGKQLHTQSQIFKYAYGQIEKEKAMQEKNKGLTFSGVISMATDGEVRTRPPIEISFKDLTLTLKGKNKNLLRTLTGKLMPGRVSAVMGPSGAGKTTFLTALAGKVTGCSIKGSVLINGKNESIHSYKKIIGFVPQDDIVHGNLTVEENLRFSARCRLPADMPKPDKVLVVERVIESLGLQAVRDSLVGTVEKRGISGGQRKRVNVGLEMVIEPSLLFLDEPTTGLDSTSSNLLLKALRREALEGVNVCMVLHQPSYTLFRMFDDLILLGKGGLTVYHGPVKKVEEYFSGVGINVPERVNPPDHLIDVLEGMVSPDGDVSVAQLPVRWMLHNGYSVPPDMLHHASSSASTSEESNEHSFAEDLWADVKLNAETKKDHLQYNFLHPKDLSNRTTPGIARQYRYFLGRVTKQRLRESKTQAVDYIILLLAGACLGTLAKVDDATFGSRGYSYTVIAVSLLCKIAALRSFSLDKLEYWREKASGISSLAHFLSKDTVDSFNTIVKPLVYLSMFYFFNNPRSSFGDNYLVLICLVYCVTGMAYILAIYLDPGPAQLWSVLVPVVLTLVANQEKDSFFVKYFGALCYTKWAMEAFTISNARRYSGVWLISRCGYLMQMGYDLKEWFPCLIILILYGVASRMIAYAFLVKSRKK* 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01883 1094 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 497 724 IPR027417 -
Pte6g01883 1094 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 501 742 IPR003439 GO:0005524
Pte6g01883 1094 SMART AAA_5 527 719 IPR003593 GO:0016887
Pte6g01883 1094 ProSitePatterns ABC transporters family signature. 642 656 IPR017871 GO:0005524|GO:0016887
Pte6g01883 1094 Gene3D - 492 737 IPR027417 -
Pte6g01883 1094 MobiDBLite consensus disorder prediction 359 390 - -
Pte6g01883 1094 FunFam ABC transporter G family member 24 495 737 - -
Pte6g01883 1094 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 451 1084 - -
Pte6g01883 1094 Pfam ABC transporter 519 669 IPR003439 GO:0005524
Pte6g01883 1094 Pfam ABC-2 type transporter 699 1094 IPR043926 GO:0140359
Pte6g01883 1094 CDD ABCG_EPDR 498 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01883 Pte-Chr6 35665160 35672041 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01883 528 731 Calmodulin-binding Proteins AT2G36910 27.434 1.29e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01883 - - qsa:O6P43_010276 1593.17