Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01881 ATGGTTCTTCATCATGGGTTTTCTACTTCGGATTCGGAACCTAACGCAGTTGCTCCATCTATGAGCACTTATCCTACCGCTGCCTCCTTCCATGCCGTCACCTCTTCCCCCGCTGTCAATGCCGTCGTGTCTACCACCATCACCAGTCCGAACACCAACTCCCGACTCTCAGGTCCACCTCGCAAAAGTAACGCTTTATCAACCACCCGCTCCACCAAGGATCGTCACACTAAGGTTAATGGCCGTGGTCGCCGTGTCCGCATGCCACCACTATGTGCAGCAAGAATCTTTCAGCTGACTCGCGAGCTGGGTCACCGTTCCGACGGCGAGACAATAGAGTGGCTTCTACGCCAGGCGGAGCCCTCGATCATTGCGGCCACAGGAACTGGGACTGTCCCTTCTGACCCGGTCACCACCAGCACAGGTAGCATCCCCTCCACAGCCCCCTCTGTTTCTTGTAAGGTCCAACCTATTTCGACAGTAAGCAGTGGTCTGGGGATGTTCGCAATGGCACTTCAACAGACGTCTCAGCAGCTACCAAATTGCAGATTGGACTTGTCTCAGCCGGTAGGAATGGACTACGCCGCCGCTGCAGCCGCAATGGCAGCTAACGGGTACAGACACATGCCATTCACTGCGCTGCTCTTGCAACCTACTTCAGCGACAGAAGACTCGGAGGACAAGCAACAAGAAGAAGCTCTGAGGGAACACTAA 714 0.5504 MVLHHGFSTSDSEPNAVAPSMSTYPTAASFHAVTSSPAVNAVVSTTITSPNTNSRLSGPPRKSNALSTTRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPSDPVTTSTGSIPSTAPSVSCKVQPISTVSSGLGMFAMALQQTSQQLPNCRLDLSQPVGMDYAAAAAAMAANGYRHMPFTALLLQPTSATEDSEDKQQEEALREH* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01881 237 MobiDBLite consensus disorder prediction 218 237 - -
Pte6g01881 237 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 28 162 IPR005333 GO:0003700
Pte6g01881 237 Pfam TCP family transcription factor 71 176 IPR017887 -
Pte6g01881 237 ProSiteProfiles TCP domain profile. 72 126 IPR017887 -
Pte6g01881 237 MobiDBLite consensus disorder prediction 126 149 - -
Pte6g01881 237 MobiDBLite consensus disorder prediction 48 67 - -
Pte6g01881 237 MobiDBLite consensus disorder prediction 48 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01881 Pte-Chr6 35656975 35658622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01881 72 222 TCP Transcription Factor Family AT2G37000 53.947 7.17e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte6g01881 TCP 2.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01881 - - qsa:O6P43_010273 264.618