Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01863 ATGCCGATCCGTAACATAGCTGTGGGTAGATATGAAGAGGCGTATCAACCAGACGCCATTAGGGCAGGTCTGGCTGAGTTCTTCTCAACCCTAATTTTTGTCTTTGCTGGCTCGGGTTCCGGCATGGCCTACAACAAGCTCACCAACAATGGACCTGCTACTCCTGAAGGCCTCATTTCCGCCTCCATCGCTCACGCCTTTGCACTTTTCGTCGCCGTTTCCATCGGTGCAAACATCTCAGGTGGACACGTCAACCCAGCTGTGACATTCGGTGCCTTCATCGGCGGTAACATCTCCCTCTTCCGCGGTCTTCTGTACATCATTGCTCAGCTTCTTGGATCCACTGTTGCTTCCTTGCTCCTTAAGTTCGTTACCGGTGGCCTGGCTGTACCTGCATTTGCTCTCTCTGGCGTGGATGTGTGGCAAGGAGTTGTCTTTGAGATCGTGATGACATTCGGACTGGTGTACACCGTTTACGCAACGGCTGTTGACCCTAAGAATGGTAGTTTGGGAACCATCGCACCCATTGCTATCGGTTTCATCGTGGGTGCCAACATCTTGGCCGGTGGGGCATTCTCCGGAGCATCCATGAATCCAGCGGTGACATTCGGACCTGCAATCGTCAGCTGGAGCTGGGACAACCACTGGGTCTACTGGCTCGGACCTCTGGTCGGTGGTGGACTTGCTGGTGTTGTGTACGAGCTGTTGTTCATCAGCCACTCCCACGAACAGTTGCCGGTTGCTGATTACTAA 753 0.5352 MPIRNIAVGRYEEAYQPDAIRAGLAEFFSTLIFVFAGSGSGMAYNKLTNNGPATPEGLISASIAHAFALFVAVSIGANISGGHVNPAVTFGAFIGGNISLFRGLLYIIAQLLGSTVASLLLKFVTGGLAVPAFALSGVDVWQGVVFEIVMTFGLVYTVYATAVDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVTFGPAIVSWSWDNHWVYWLGPLVGGGLAGVVYELLFISHSHEQLPVADY* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01863 250 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Pte6g01863 250 SUPERFAMILY Aquaporin-like 12 245 IPR023271 -
Pte6g01863 250 FunFam Probable aquaporin TIP1-1 4 250 - -
Pte6g01863 250 PANTHER AQUAPORIN-8 6 245 IPR034294 -
Pte6g01863 250 CDD MIP 21 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g01863 250 Gene3D Glycerol uptake facilitator protein. 4 250 IPR023271 -
Pte6g01863 250 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g01863 250 PRINTS Major intrinsic protein family signature 146 164 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g01863 250 PRINTS Major intrinsic protein family signature 179 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g01863 250 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g01863 250 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g01863 250 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g01863 250 Pfam Major intrinsic protein 16 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01863 Pte-Chr6 35517127 35518300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01863 1 251 Major Intrinsic Protein MIP AT2G36830 79.365 2.87e-142 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01863 K09873 - zju:107431962 410.223