Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01861 ATGGATCGAGAATGGGGTTCCAAGCCTGGAAGCGGTGGCGCCGCCTCTGCTCAAAACGAAGCCATCGACCGTAGAGAGCGTCTTCGTCGACTTGCTCTCGAGACCATAGATCTTGCCAAAGATCCCTATTTCATGCGCAATCATCTTGGAAGTTACGAGTGTAAGCTTTGCTTGACCCTGCACAATAACGAAGGGAATTACTTGGCGCACACACAGGGTAAGAGGCATCAGACCAATTTAGCTAAGAGAGCAGCACGTGAGGCTAAAGATGCTCCAGCTCAACCTCAACCCCATAAACGCAAAGTCACTGTTCGCAAGTCTGTCAAAATCGGTAGGCCTGGTTACCGTGTAACAAAACAATTTGATCCTGAAACGAAGCAAAGGTCTCTTCTTTTTCAGATTGAATATCCAGAAATTGAAGACACTATAAAACCAAGGCACCGATTTATGTCTTCATATGAACAGAGGGTGCAATCCTTTGATAAAAGGTATCAGTATCTTCTGTTTGCGGCTGATCCATATGAAATCATAGCTTTCAAGGTTCCTAGCACAGAAATTGACAAGTCCACTCCTAAATTTTTCTCACACTGGGACCCAGATTCAAAAATGTTCACGTTGCAGTTGTATTTCAAAGCTAAGCCACCTGAGGTGAACAAGGCACAGGCTCCCCCTGCAGCTAATGGAACTGCAACTCCTGGTGTCCCTCCAAGGCCTATGGCCCCGCCACCTCAAGTGCCTCCACCTCCTCCCCCTGCGGCCCAAGGTGCACCCATTGGTAATCCTCCTCGAGCCCCTCCTCCATTGCCTGGATCATTGCCGCCTCCACCTCCAATGGCCAACGGTCCCAGACCTATGCCTCCAAGTGGAGCTCCACCTATCTCTCCACCACCACCTATGAATGCTGGAAGTAGGCCCCCATCTATGGCCCCCCCACTAGGTTTCTCGGCACAACAGATGCAGGGGCAGGGAATTCGTCCACCTCCACCACCTCCTAGCGTGGGGCAGTAG 1008 0.506 MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPHKRKVTVRKSVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDTIKPRHRFMSSYEQRVQSFDKRYQYLLFAADPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKAKPPEVNKAQAPPAANGTATPGVPPRPMAPPPQVPPPPPPAAQGAPIGNPPRAPPPLPGSLPPPPPMANGPRPMPPSGAPPISPPPPMNAGSRPPSMAPPLGFSAQQMQGQGIRPPPPPPSVGQ* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01861 335 Pfam Zinc-finger of C2H2 type 52 76 - -
Pte6g01861 335 SMART CactinC_cactus_3 89 216 - -
Pte6g01861 335 Pfam Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) 110 204 IPR031781 -
Pte6g01861 335 SUPERFAMILY beta-beta-alpha zinc fingers 48 82 IPR036236 -
Pte6g01861 335 Gene3D - 94 218 - -
Pte6g01861 335 SMART ZnF_U1_5 49 83 IPR003604 GO:0003676|GO:0008270
Pte6g01861 335 FunFam Splicing factor 3a subunit 2 94 218 - -
Pte6g01861 335 ProSiteProfiles Zinc finger matrin-type profile. 52 82 IPR000690 GO:0003676|GO:0005634|GO:0008270
Pte6g01861 335 MobiDBLite consensus disorder prediction 1 21 - -
Pte6g01861 335 Gene3D Classic Zinc Finger 46 89 - -
Pte6g01861 335 MobiDBLite consensus disorder prediction 217 335 - -
Pte6g01861 335 MobiDBLite consensus disorder prediction 229 305 - -
Pte6g01861 335 PANTHER SPLICING FACTOR 3A SUBUNIT 2 1 331 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01861 1 228 C2H2 Transcription Factor Family AT2G32600 87.719 3.31e-141 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01861 K12826 - fve:101304789 440.269