Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01859 ATGTCTACATTGAGAAAGAAGTGGTTCCGCCTGAGCACTGTGAAAGTCAACCTCGGCTGCGGCAGCTGCAGAAGGCCTAAACTCTTCGACATATATAACCCTAAGCCGAAAGCAAAGTACCCCACTTACCACAAGCACAAGAACTATTGCACTCACCCCATCTCGTCAAGCTCTGGGGATAAAGATGATTCTGTTACCACTGCCAGCACTACGACCCCCACCACTGCTTCCACTACCCCTTTCTCTCCTTGTCTATATGACTCATCGTCACAGTTCTCAGAGAAAAGGACAACCTACCCGAAGACCATGAGCAGTACAATAGGAGGAGGTCCTGGAGGATTTGGCAGAATAGGAGATGAGAGCGTGGCTGTGGAGAAGGAGTCAGACGACCCTTACTTAGATTTCAGGCAGTCCATGCTTCAAATGATTTTAGAAAATCAGATATACTCAAAGGAAGATCTGAAACAACTTCTCAATTGTTTTCTTCAGCTCAATTCGCCATACCATCATGGGATCATCATCAGAGCCTTCACGGAGATCTGGAATGGAGTCTATTCGAACAAATTGCATTTGGGTCGTCGATCACGTGACCACGTTTAA 600 0.465 MSTLRKKWFRLSTVKVNLGCGSCRRPKLFDIYNPKPKAKYPTYHKHKNYCTHPISSSSGDKDDSVTTASTTTPTTASTTPFSPCLYDSSSQFSEKRTTYPKTMSSTIGGGPGGFGRIGDESVAVEKESDDPYLDFRQSMLQMILENQIYSKEDLKQLLNCFLQLNSPYHHGIIIRAFTEIWNGVYSNKLHLGRRSRDHV* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01859 199 ProSiteProfiles OVATE domain profile. 124 183 IPR006458 -
Pte6g01859 199 MobiDBLite consensus disorder prediction 54 77 - -
Pte6g01859 199 Pfam Transcriptional repressor, ovate 128 183 IPR006458 -
Pte6g01859 199 NCBIfam uncharacterized plant-specific domain TIGR01568 122 182 IPR006458 -
Pte6g01859 199 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 58 185 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01859 Pte-Chr6 35468405 35469878 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pte6g01859 Ovate 3.3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01859 - - qsa:O6P43_006009 199.519