Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01858 ATGGGGAAGAAGATGAAGCTCCCTTTTATCCTGAAGAACAGTGCAGACGTAAAAGCTTCATGGCCATGGCCTTCTTGTAACCAACCTCGAACTCTCTCTTTCAGAAACAACAATGAAATCTTCAAGACCATAAACTCAGCATTCTTAGATGCCACTGTCGATGTATTGGACACTCCTGATCCTTCATTCTTCACAAACTCCTCATCCGACTCTACAAGTCTCTCAACTGCATCTGAAGACTCTAGAAGAGGAGAAGATCCCGTTGAGACTGTGATTCGTGGGCTGCGTTCAGAAAGGCTGTTCTTTGAGCCTGAAGAGACAAGCTCCATTTTGGAATCCAAGGCATCCGTAGCAGAGTTACCTTTCAAAGAAAGTGTGATACTATCTATTGAGTCCAAAGATCCTTTCGTAGATTTCCGCAAGTCAATGGAGGAGATGGTTGAGGCACATGGAGTCAAGGACTGGGAAGGTCTCGAAGAGCTCTTATCATGTTATTTGCGAGTCAACGGGAAAAGCAACCATGGCTATATAGTGGGAGCGTTCGTAGACTTGTTGACTGGTCTTGCCATATCCACTCGTCCTTGCCCGTGTTCTTGTCCTCCTGGCTGTTCGGATCATTCCCCTTCTTCGCCTTTATCGTTTTACACTTCTTCATCTGCATCTTCCTCCTCTAGTACTCCTTGTTTATCTTGTTTAGAAGCTGAGGAAGAACCTGGTACTCCTTCCTCCTATAATTCATTAATGTTACAGGTCAAGAAAGTCGATAGTACTGGTTCTAATGATGATGAAGCTTCATCTTCATCTTCAAATGTTTGA 816 0.44 MGKKMKLPFILKNSADVKASWPWPSCNQPRTLSFRNNNEIFKTINSAFLDATVDVLDTPDPSFFTNSSSDSTSLSTASEDSRRGEDPVETVIRGLRSERLFFEPEETSSILESKASVAELPFKESVILSIESKDPFVDFRKSMEEMVEAHGVKDWEGLEELLSCYLRVNGKSNHGYIVGAFVDLLTGLAISTRPCPCSCPPGCSDHSPSSPLSFYTSSSASSSSSTPCLSCLEAEEEPGTPSSYNSLMLQVKKVDSTGSNDDEASSSSSNV* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01858 271 Pfam Transcriptional repressor, ovate 132 188 IPR006458 -
Pte6g01858 271 MobiDBLite consensus disorder prediction 64 87 - -
Pte6g01858 271 MobiDBLite consensus disorder prediction 215 271 - -
Pte6g01858 271 ProSiteProfiles OVATE domain profile. 128 187 IPR006458 -
Pte6g01858 271 NCBIfam uncharacterized plant-specific domain TIGR01568 127 188 IPR006458 -
Pte6g01858 271 MobiDBLite consensus disorder prediction 215 230 - -
Pte6g01858 271 MobiDBLite consensus disorder prediction 239 271 - -
Pte6g01858 271 MobiDBLite consensus disorder prediction 64 78 - -
Pte6g01858 271 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 69 188 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01858 Pte-Chr6 35453575 35455013 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pte6g01858 Ovate 1.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01858 - - tcc:18598361 283.878