Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01840 ATGCGAGGCTATTCATCTTTGAGACCTATTGCCGAATACATAAGCGAATTGACATGGGGTATTGTTCTTGCTGAGAAGTTGAATTTAAACTATGAGGATGCTGAGAAATGGATTGTGAATCTTATTAGAACTTCAAAGCTCGATGCGAAAATTGACACGGAGTCGGGAACTCTTGAATTGGATTGTGAATCACCCTGA 198 0.399 MRGYSSLRPIAEYISELTWGIVLAEKLNLNYEDAEKWIVNLIRTSKLDAKIDTESGTLELDCESP* 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01840 65 Pfam PCI domain 23 59 IPR000717 -
Pte6g01840 65 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 22 61 IPR016650 GO:0003743|GO:0005737|GO:0005852
Pte6g01840 65 SUPERFAMILY "Winged helix" DNA-binding domain 23 60 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01840 Pte-Chr6 35332632 35333059 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01840 22 65 Eukaryotic Initiation Factors Gene Family AT3G57290 77.273 2.81e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01840 K03250 - thj:104801979 73.9442