Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01827 ATGTCTAAGTCGTCTCCGTCATCACCTCCATCTTCTACTTCGGGCGCTTCTACTTCTTCCTGGGATAGAAGATTAAGCTGCGAGGCGGATCAGATCGTCAAAACGGAGATTGAGGCGGCTGAAACTCTAGCCGACCTTGCAGACTTAGCTATGCGTGAGTCTAGTGGCGCTTATGACTCACAGAACACGTGGTGGATTAGTACTAGTAAAGGCAAACGTGGTCGCAGGCGACTCAACGCTACTGAATCCTCGCCTCCCTCTGTCTACCTGACCGTCCCCAGCCCCGTGGACACCAATTCTGTCTCTGTAAACACTATGGATCTCAGTGAGGGGCAAGCTGTTCGAGCTCACCAGATGGAGGAGAAGTATCGAAGTTGTGAATCTATTGATCCTTCAAATGCTGTGCAGGAGGACAAGGGAGAGCAGCACGATGTCCAACTACACAAAGGGAACACTTCATCTGTTAAAAGCTGTCATTCAACTGGTTGTGGCAGGTCAAGACGTAACCTGACTGAGGAAGAAAAGGAAACGAGGAGAATTCGTCGGGTTTTAGCTAACAGAGAGTCAGCTAGGCAGACAATTCGCCGTAGGCAGGTTCTTTGTGAAGAGTTAACAAGAAAAGCAGCTGAATTAGCTACGGAGAATGAAAATCTAAAAAAGGAAAAGGATTTGGTTTTGCAACAGTTCAAGTCTTTGGAGACCACAAACAGGCGACTGAAGGAGCATATGGCCTCAGCAATAAAGACTGAAGCCGAAAAAGATGTGGTTCCACATAAGTCAGTTCCGGCTGGAAATTATATACATTCATCAACGAGATATCCATTGGTATTGTATAGCCCCCCTCCTATTGCACCTTTCTTTTGGCCAACTATTGGCCAATCTTCCTATCCTGTTCATCTTCATCACGGAGCACATGGTTCCCATGTCATTCAATCAAATATTTCTGCGCAAGATTGCCCTTTGTCTGATTCATGTGAGCATAGTAACTACATAAATGACAATGGGGGACAAATGCCCTTATATGTACTGCCATATCCTTGGTTCCTCCCTCTGCCAGATTATGGAAATGGTCAAATATCAGCCACTGTTGGGGTAAAAGAAGAATTGTCATCTAGTATAGTGAATAATCAATACAGTCCTAGTTCATCTTCAAATGAAATAAAGCATGTAGATAATCCTAGTGTCACTCTACCCGTGGATCTAAGAAAGGAAGCTTTTGGAACAACAGAAATAAGACGTGCTCAAGAACCCAGAATGAATGCTATAAGATTTTCTTCAAATGGAAATGAACGGAGAGCAGGATCAGATATGAAAGAATCATCATCCCGTGGTCTTGGTCTGGCTACATCCGTCAAGCATGAGAATGAGATGTTCTCTCAGCGCCCTCCTAAGGGGGAGGCGGCCTCAGTGGTCTCTCATAGTGCATGTGCTCTTCCAGAAAAGAAACAAGAAGATGTCACTTGTTCTAGTAGAATTCTATCGGGTGCAGTTGCTGCTGCTGAGGCTAGAAAAAGGAGGAAGGAACTTACCAAGCTAAAAAATATTCATGGTCGTCAGTGCCGGATGAACTAA 1572 0.4491 MSKSSPSSPPSSTSGASTSSWDRRLSCEADQIVKTEIEAAETLADLADLAMRESSGAYDSQNTWWISTSKGKRGRRRLNATESSPPSVYLTVPSPVDTNSVSVNTMDLSEGQAVRAHQMEEKYRSCESIDPSNAVQEDKGEQHDVQLHKGNTSSVKSCHSTGCGRSRRNLTEEEKETRRIRRVLANRESARQTIRRRQVLCEELTRKAAELATENENLKKEKDLVLQQFKSLETTNRRLKEHMASAIKTEAEKDVVPHKSVPAGNYIHSSTRYPLVLYSPPPIAPFFWPTIGQSSYPVHLHHGAHGSHVIQSNISAQDCPLSDSCEHSNYINDNGGQMPLYVLPYPWFLPLPDYGNGQISATVGVKEELSSSIVNNQYSPSSSSNEIKHVDNPSVTLPVDLRKEAFGTTEIRRAQEPRMNAIRFSSNGNERRAGSDMKESSSRGLGLATSVKHENEMFSQRPPKGEAASVVSHSACALPEKKQEDVTCSSRILSGAVAAAEARKRRKELTKLKNIHGRQCRMN* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01827 523 MobiDBLite consensus disorder prediction 147 165 - -
Pte6g01827 523 Pfam bZIP transcription factor 174 236 IPR004827 GO:0003700|GO:0006355
Pte6g01827 523 SMART brlzneu 174 238 IPR004827 GO:0003700|GO:0006355
Pte6g01827 523 Coils Coil 201 235 - -
Pte6g01827 523 CDD bZIP_plant_GBF1 179 229 IPR045314 GO:0003700|GO:0006355
Pte6g01827 523 PANTHER G-BOX-BINDING FACTOR 3-RELATED 10 366 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pte6g01827 523 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 176 239 IPR004827 GO:0003700|GO:0006355
Pte6g01827 523 MobiDBLite consensus disorder prediction 133 174 - -
Pte6g01827 523 MobiDBLite consensus disorder prediction 1 24 - -
Pte6g01827 523 SUPERFAMILY Leucine zipper domain 178 233 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01827 Pte-Chr6 35192557 35197091 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01827 51 522 bZIP Transcription Factor Family AT1G19490 36.420 2.20e-65 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte6g01827 bZIP_1 2e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01827 - - qsa:O6P43_009543 401.749