Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01824 ATGGACTTCCATATGAAGGAATGGAAAGACCAGCATGAGTCAGAACCCCAACATTCTTCCAAGATACCAAAACTCTTCCCTGAGCCCCATCAAACTTCTGACTCTGCTCTCCCTTTGTTTGTATCTGAACCCAATTCTAAAATCAACAACCTGACAGCATTTCCAGATTCTACATCGGCAGCTAACAGATTTCCCAGGATTGGAAGTTACTTCAGCTTGGCTCAATGGCAGGAACTTGAGTTGCAAGCTCTGATATTCAGGTTTATGCTGGCAGGAGCTGCTGTGCCACCTGAGCTCCTCCAGCCAATCAAGAAAAGTCTTCTTCATTCTCACCCGTACTTCCTCCATTACTCTCCTAATCAACCTGCTCTACTACCATCGGGATATTGGGGAAGGGCTGCCATGGATCCAGAGCCAGGTCGGTGTAGGAGGACTGACGGGAAAAAATGGCGATGTTCGAGGGAAGTAGTATCTGGACAGAAATACTGCGAGCGCCATATGCATCGCGGCAGAAATCGTTCAAGAAAGCCTGTGGAATCTCCCACATCAACCACCAAGGGTGGGGTTGGCGGTGGTGATGAAATTCTTGGTGCCAGCACAACCAATATATCTGCGCCACTCGTCGCAGCAGCAGCTGTTTCAATGAGATCACCTTTTGATCTTCTCCAACTTAACCATCGACGCAGTTGCTCTGGGCCAAAAATCGAGAATAAGGGCCTGTTTGGAAACCAAAATGGAGATAGCAGGTCTGGCGATGGCCATATACTGCGACATTTTATCGATGATTGGCCAAGATCGCTTCAAAACGCAGATAATGCTGAAAGCCATGCTAACTCTTTGACCTCATCTACATGCCTCTCCATTTCAATGCCTGGAAATTCTGCCTCGGATGTCTCATTGAAGTTGTCCACTGGAAATGGCGAAGACCCATGTCCCAGGAATGGAAACGTAGAATCTGTGCAACAATCCCAATTGGGTTGGGCAGAAGGATGGAATCCGAATAGTCATGTGGCTTCAATGGGAGGACCACTTGCTGAGGTTCTAAGATCGTCGACCTCTTCCTCACCAACAAGCGTTCTACATAAAGTGCCAAGATGTTCTACTTCGGAGAGCTAG 1116 0.4776 MDFHMKEWKDQHESEPQHSSKIPKLFPEPHQTSDSALPLFVSEPNSKINNLTAFPDSTSAANRFPRIGSYFSLAQWQELELQALIFRFMLAGAAVPPELLQPIKKSLLHSHPYFLHYSPNQPALLPSGYWGRAAMDPEPGRCRRTDGKKWRCSREVVSGQKYCERHMHRGRNRSRKPVESPTSTTKGGVGGGDEILGASTTNISAPLVAAAAVSMRSPFDLLQLNHRRSCSGPKIENKGLFGNQNGDSRSGDGHILRHFIDDWPRSLQNADNAESHANSLTSSTCLSISMPGNSASDVSLKLSTGNGEDPCPRNGNVESVQQSQLGWAEGWNPNSHVASMGGPLAEVLRSSTSSSPTSVLHKVPRCSTSES* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01824 371 MobiDBLite consensus disorder prediction 329 371 - -
Pte6g01824 371 MobiDBLite consensus disorder prediction 1 33 - -
Pte6g01824 371 ProSiteProfiles WRC domain profile. 136 180 IPR014977 -
Pte6g01824 371 Pfam WRC 137 179 IPR014977 -
Pte6g01824 371 MobiDBLite consensus disorder prediction 168 194 - -
Pte6g01824 371 ProSiteProfiles QLQ domain profile. 70 105 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pte6g01824 371 MobiDBLite consensus disorder prediction 346 371 - -
Pte6g01824 371 Pfam QLQ 71 103 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pte6g01824 371 PANTHER GROWTH-REGULATING FACTOR 5 37 295 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pte6g01824 371 SMART QLQ_2 69 105 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pte6g01824 371 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01824 Pte-Chr6 35157134 35159222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01824 1 363 GRF Transcription Factor Family AT3G52910 47.328 3.26e-84 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pte6g01824 WRC 2.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01824 - - qsa:O6P43_009532 465.692