Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01821 ATGCAGAAGCCAGAGGCTGGGAAGAAGAAGAAGAAGGTTCTTCATGAGACTCACCGTACCATTTACAAAGGTGCAAGAAAGAGGAAGGGCAAATGGGTGAGTGAGCTACAACAACCTCACAACAAATCTCGAGTTTGGCTAGGCATAGCAGCTATAGCACATGATGTTTCTGCCTTGGCTTTGATGGGTGATGAGTCGGCTTCCTTAAATTTTCCAGAGGTAGCCCCCGCAGTACCACGCCTTGATTCTTTCATATCAGTAAGGGATATTCAGCATGCTGGAACAAAAGCTGCTAGGAAATACTGTGGGACGGTGAAAACATTTGCTTCCTCCTATGATGGCGAGTGTGAGTCATCGTGTTCGTCCACTACAGCGTTTAGTCCAGGCCAGGACTACAGTGAGGAGAAGTCTGATAGGAGTTTGTTTTGGGACGAGGAGGAGGTCTTTAACATGCCTGTATTGATGAATAGCATGGCAGAAGGGTTGATCATCACACCACCTGCCTTGCAAAATGGGTTCAATTGGGTTGATATAGAAACAACCATCGATTTGAGTCTTTGGTGA 564 0.4628 MQKPEAGKKKKKVLHETHRTIYKGARKRKGKWVSELQQPHNKSRVWLGIAAIAHDVSALALMGDESASLNFPEVAPAVPRLDSFISVRDIQHAGTKAARKYCGTVKTFASSYDGECESSCSSTTAFSPGQDYSEEKSDRSLFWDEEEVFNMPVLMNSMAEGLIITPPALQNGFNWVDIETTIDLSLW* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01821 187 ProSiteProfiles AP2/ERF domain profile. 21 72 IPR001471 GO:0003700|GO:0006355
Pte6g01821 187 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 5 187 IPR045277 GO:0003700
Pte6g01821 187 SMART rav1_2 21 78 IPR001471 GO:0003700|GO:0006355
Pte6g01821 187 CDD AP2 20 74 IPR001471 GO:0003700|GO:0006355
Pte6g01821 187 Gene3D AP2/ERF domain 21 74 IPR036955 GO:0003700|GO:0006355
Pte6g01821 187 SUPERFAMILY DNA-binding domain 21 72 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01821 Pte-Chr6 35135386 35135949 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01821 3 187 AP2-EREBP Transcription Factor Family AT4G25490 38.860 2.18e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01821 - - gmx:100813230 187.193