Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01820 ATGGAAGATCATCATCACCAACAGTTTGGCATGCCCGAGCTCAGGCAACTCGTGAATGGAGCAAGGTCAGCTCATTTCCAAGCTATGCTGCCCGCACCAACCACTGCAGACCTTTTCGCCACTCATCGCAATCTAAACCCTAATAGCCATCCCCACCAGCATGAGCAACACTTGGAGATGCTCATGTTTCGACCTCATCAAGTAGCTGATGTAATGTCTCCCATGCTACACAACTTCGCTTCTGATTCTATTTCTACTCCTACTACTGTTGCAGCTGCCGCCGCCGCCGCTACTAATCCTATTACCACTGCTTCAACTCCTTCTCTCAATGGTTTTGAGGTCGAAACTGCTGGTTGCTTCGGAGGAGATACAACCACTGGACGATGGCCAAGACAAGAGACTCTTACTCTCCTTGAGATCAGATCTCGACTTGACCCTAAATTCAAAGAGGCAAATCAAAAGGGTCCCTTATGGGACGAAGTTTCCAGGATCATGTCTGAAGAATATGGTTATCAGAGGAGTGGAAAGAAATGCAGGGAAAAGTTTGAGAACTTGTATAAATACTACAAGAAAACTAAAGAAGGCAAGGCAGGAAGACAGGATGGGAAAAACTACAGATTCTTTCGCCAACTCGAAGCTCTCTGTGGAGAAAGCAGCAGCAATCCCACCTCAGCCCCAGACAACAATTTTGGTTTTCAGGCAGCGATTGATCAGACCCCATCCATAACAACTCATGATCAGAATTTCCAACCTGTCATTCAGTATTGTGATAGCCTTAGCCTCACCAACACCACTGCGTTTGACACGTCTTCTACCGACGTCAATGACTTAAGCAACGAGGCCTTAATGGAGAATGACTCCTTGGAGAAAAGGAGGAAAAGAAGGAGCAGTTCCCGAAGAGGATGGAAGGCCAAAATAAAAAACTTCATAGACTCGCAGATGAAGAAGCTGATGGAGAAGCAAGAAGGTTGGCTGGAGCTGCTGACGAAGATCCTGGAACAAAAAGAGAGGGAGAGAATGATGCGGGAGGAAGAGTGGAGGAAACAAGAGGTCGCAAGGTTAGAGAGGGAACATAAGTTTTGGGCAAGAGAGAGGGCATGGATTGAAGCTAGGGATGATGCGCTGATGGAGGCTTTGCAAAAGTTAACTGGACGAGAAATAAAAGGTAATTCTCCTGACCATCGTGTTGATTTAATGGCTGCTGAGATTCAAAATCACAGTGAGAATAACCATAACGAAGATGGAAGTGAAATACTTAATATCAACGCGAGAGTTTCTGATCGAAGTTGGTCCGACTCTGAGATAACAAGTCTAATACAGCTGATAAATGAAATGGGGTCCAGGTTCCAGCAATGTGGGGGCTCAGAACAAAATCTATGGGAGGAAATGGCTACTAAAATGGCTTGCGCAGGTTATGAACAAAGGAGTGGTTCAATGTATAAGAACCAATGGGAAAGCATTCAAAAGTGCAACCGGAACATTAAGAAGGAGAGTAACAAGAAGCGAAAGGAAAAAGCGAGCAATTGCTACTATGAGAGTATTGAACAGCCGTCTATATTTAATCAAGGCAGTTCCTACTGTGATATTAATGATGGAGAACGACAAGAAACAAGAAGGTTTAGAGATGATACTGATGGTTGTTCTCCTTCAAATTCGAACGCCGGAAATGCAGTCTCTGATAGTTGTTTCCGGTTCTTCATGACTGAGGGTGAAAGCTTATGGGAAAACTACGGCATGAAGCTCAACAAGCTTGCAAATGAAATTCAGTGA 1770 0.4463 MEDHHHQQFGMPELRQLVNGARSAHFQAMLPAPTTADLFATHRNLNPNSHPHQHEQHLEMLMFRPHQVADVMSPMLHNFASDSISTPTTVAAAAAAATNPITTASTPSLNGFEVETAGCFGGDTTTGRWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEVSRIMSEEYGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKNYRFFRQLEALCGESSSNPTSAPDNNFGFQAAIDQTPSITTHDQNFQPVIQYCDSLSLTNTTAFDTSSTDVNDLSNEALMENDSLEKRRKRRSSSRRGWKAKIKNFIDSQMKKLMEKQEGWLELLTKILEQKERERMMREEEWRKQEVARLEREHKFWARERAWIEARDDALMEALQKLTGREIKGNSPDHRVDLMAAEIQNHSENNHNEDGSEILNINARVSDRSWSDSEITSLIQLINEMGSRFQQCGGSEQNLWEEMATKMACAGYEQRSGSMYKNQWESIQKCNRNIKKESNKKRKEKASNCYYESIEQPSIFNQGSSYCDINDGERQETRRFRDDTDGCSPSNSNAGNAVSDSCFRFFMTEGESLWENYGMKLNKLANEIQ* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01820 589 Coils Coil 487 507 - -
Pte6g01820 589 FunFam trihelix transcription factor PTL-like 129 191 - -
Pte6g01820 589 CDD GT1 128 193 - -
Pte6g01820 589 ProSiteProfiles Myb-like domain profile. 422 488 IPR001005 -
Pte6g01820 589 Gene3D - 129 191 - -
Pte6g01820 589 Gene3D - 430 493 - -
Pte6g01820 589 ProSiteProfiles Myb-like domain profile. 121 186 IPR001005 -
Pte6g01820 589 Coils Coil 325 345 - -
Pte6g01820 589 Pfam Myb/SANT-like DNA-binding domain 128 214 IPR044822 -
Pte6g01820 589 Pfam Myb/SANT-like DNA-binding domain 428 515 IPR044822 -
Pte6g01820 589 PANTHER FI21293P1 97 516 - -
Pte6g01820 589 SMART sant 426 496 IPR001005 -
Pte6g01820 589 SMART sant 125 188 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01820 Pte-Chr6 35122037 35125010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01820 1 587 Trihelix Transcription Factor Family AT5G03680 44.265 7.82e-135 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte6g01820 Myb_DNA-bind_4 2.7e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01820 - - aprc:113870891 628.632