Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01816 ATGGATCCAAAAGACGAAGGGTATAAAGATTCTCCAACGTCGTCTTCTGGATTTGAAGGTCTGATTCAGACTGGTGCGTCGTCTTCGACTCAGATGGATCCCGAATTAATTGAGTATTCTCATATTCAATCGGGGCTGTCAGAACCATTACTGGGAACTCAGTCATTTTCATCTCAGGGTTTTTTCATAGACAATTCTGCTGGATTTTCTATGGAGAACGTCGGCCTTTCTGGATCTCTTCCATCTTCGACGTTTGCTTCTCCTTTAATGGAGTTTGAAGCTTTTTCAATCCCGCACCCGACGGCTCCTTCATCCTCTTCTCCTCAAATGATTGAGCTCAAAGCTAGTTCAACTACTTCAACTGTACCATCATCAGCTAGGGAAGTGATGGAGCACATAGATGCCCCTCAACCTCTTGAATGTTTACTGGGGAATCCAATTCCGCCATTCCTGTCGAAAACATTCGACCTTGTGGAGGATCAATCACTTGACCCCATTATCTCGTGGGGTGCGGTCGGCCAGAGCTTCGTGGTCTGGGACCCTGTGGAGTTTGCGAGACTTGTCTTGCCACGCAATTTCAAGCATAACAATTTCTCCAGTTTTGTTCGCCAGCTTAATACTTATGTGGGTATTTCTGTAACACGAAACACGGATTGTAATGGCTTTGGTAATCTGTATGTAATTTTTTTAGCTGTTCTTTTTTTATGTAAATTGTTTTTCGTTTTGCCCCCTCCCTACTATTTTCCTTTTGTATTGTTAACTAATTCATTGGTTGATAAGTTGTTGATGTTCTTTTGTTGTATTGTATCATGTACTTGCAGCTGGGAAGATACTGTATCAGTTATCAATGCAATATTATGCAGCCGTTTTCCTCTTCTACATTTTTCTTTTCAATTGATAGGATTTGATTTCATATAG 918 0.4129 MDPKDEGYKDSPTSSSGFEGLIQTGASSSTQMDPELIEYSHIQSGLSEPLLGTQSFSSQGFFIDNSAGFSMENVGLSGSLPSSTFASPLMEFEAFSIPHPTAPSSSSPQMIELKASSTTSTVPSSAREVMEHIDAPQPLECLLGNPIPPFLSKTFDLVEDQSLDPIISWGAVGQSFVVWDPVEFARLVLPRNFKHNNFSSFVRQLNTYVGISVTRNTDCNGFGNLYVIFLAVLFLCKLFFVLPPPYYFPFVLLTNSLVDKLLMFFCCIVSCTCSWEDTVSVINAILCSRFPLLHFSFQLIGFDFI* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01816 305 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 136 208 IPR027725 -
Pte6g01816 305 Pfam HSF-type DNA-binding 150 208 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte6g01816 305 SUPERFAMILY "Winged helix" DNA-binding domain 148 209 IPR036390 -
Pte6g01816 305 PRINTS Heat shock factor (HSF) domain signature 201 213 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte6g01816 305 PRINTS Heat shock factor (HSF) domain signature 188 200 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte6g01816 305 PRINTS Heat shock factor (HSF) domain signature 150 173 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte6g01816 305 MobiDBLite consensus disorder prediction 10 30 - -
Pte6g01816 305 FunFam Heat stress transcription factor B-4 144 224 - -
Pte6g01816 305 Gene3D - 144 225 IPR036388 -
Pte6g01816 305 SMART hsfneu3 146 241 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte6g01816 305 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01816 Pte-Chr6 35092947 35093864 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01816 136 208 HSF AT5G03720 80.822 8.96e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pte6g01816 HSF_DNA-bind 7.8e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01816 K09419 - qsa:O6P43_005885 217.624