Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01806 ATGACCAAGGCTTCTCGCTTAGCTTCTCCTTTGGCCTTGGCCTTAAGCTTCCTCTTCCTCACACCATCACTGGGCTTTGTAGCTCAGAATGACACTGAAGCCCTCACACAGTTTCGCCTTCAAGCAGATGCTCATGGCTACCTCCTCTCTAACTGGACTGGCCACAGCGCCTGCTCTACAACATGGCGTGGTGTCCTATGCTCTTCAAATGGAAGAGTCGTCGCCCTCTCCCTTCCTTCTCTCAATCTTAGAGGCCCCATTGAATCCCTTTCATCGCTTCAACAACTACATCTGCTTGATCTGCATGACAATCGTCTCAATGGCACTATTAGACCTATTACCAACTGCACCCATCTCAAGCTTCTTTATCTCGCAGGCAACGATTTCTCTGGTGAGATACCGCCTGATATAGCTTCATTGAGCCGTTTACTCAGGCTTGACCTCTCAGACAACAACATACGAGGCCCCATTCCTGAGGAAATGTCTCAATTGACTAGGCTTCTCACTCTTCGTTTACAGAACAATGAGTTATCTGGGTCAATCCCTGATTTTTCTGCTTCCTTAACTCATCTCAATGAGCTCAATATGACCAACAACGAATTTTCTGGACGCTTACCTGACGGGATGCTTGGGAACTTCAGTGAAAAATGCTTTTCTGGGAATGAAGGTCTATGTGGTTCTAGCCCACTGCCTGAATGTTCGTTCACAACAGAGGCTCCACCACCAGTTGCATCCACTCTGATCGTTCCTTCTAACCCAAGCTCGTTGCCTCAGACAACAGTGGTTCCTCAAGACAAAAGCCACACAAGAAAAGGGTTAGGCACAGGAGCTATTGTAGCAATAGTGGTCGCCAATTGTGTGGCATTGTTGGTAATGACATCTTTCATTGTAGCACACTTCTGCGCTAGAGATCGAAGCTCGAATTACATAGTGGGCAGTGAGAGCGGGAAGAGGAGAAGTGGGAGTAGCTATATGAGTGACAAGAAAGTTTATGCAAATGGGGGTGCTGATAGTGATGACACTACCACTACTGACAGAAGCAAGCTTGTGTTCTTTGATAGAAGGAAGCAATTTGAGCTTGAAGATTTGCTCAGGGCATCAGCTGAAATGCTTGGAAAAGGTAGCCTTGGGACAGTATACAAGGCAGTTCTTGATGATGGCTCCACTGTCGTCGCCGTCAAGAGACTCAAGGACACGAATCCGTGTGCTAGAAAGGAGTTCGAGCAGTACATGGATGTGATCGGAAAGCTCAAGCATCCTAACATTGTGAAATTCAGAGCATACTACTATGCAAAGGAAGAAAAGCTTCTTGTATATGATTATCTCTCTAATGGAAGCTTGCATTCACTCATTCATGGGAACAGGGGTCCTGGAAGAATTCCATTAGATTGGACTACAAGGATCAGCTTGGCTTTGGGAGCAGCCCGAGGACTTGCTCATATTCATGAGGAATATTGTGCAGCAACAATACCACATGGGAACGTGAAATCCTCGAATATTCTCCTAGACAAGAACGGTGTTGCTTGCATTGCTGACTTTGGCTTGTCACTGCTGCTGAACCCTGTTCATGCTGTAGCAAGATTAGGAGGATACAGAGCTCCAGAGCAAGCAGATGCGAAGAGGCTATCTCAAAAGTCAGATGTGTATGCCTTTGGGGTCTTGCTGTTGGAAATTCTTACAGGGAGAGCTCCTTCTCAGTATCCTGCGTCAACTGGTTTAAAAGTTGATGAGGAGGAACAAGCTGTTGATCTTCCCAAATGGGTTCGATCAGTGGTGAAGGAGGAGTGGACTGCAGAGGTGTTTGATCAAGAACTCTTGCGCTACAAGAACATTGAGGAAGAGCTCGTGTCAATGCTGCATGTGGGGTTGGCATGCGTGGTGGCACAACCTGAGAATAGGCCAACAATGGCTGAAGTGGTCAAGATGATTGAGGAAATCAGGGTGGAGCAATCACCTATAGGAGAGGAATATGATGAATCTCGCAATTCACTTTCTCCTTCCCTTGCTAACACAGATGATGGGCTAGTTTAA 2031 0.4658 MTKASRLASPLALALSFLFLTPSLGFVAQNDTEALTQFRLQADAHGYLLSNWTGHSACSTTWRGVLCSSNGRVVALSLPSLNLRGPIESLSSLQQLHLLDLHDNRLNGTIRPITNCTHLKLLYLAGNDFSGEIPPDIASLSRLLRLDLSDNNIRGPIPEEMSQLTRLLTLRLQNNELSGSIPDFSASLTHLNELNMTNNEFSGRLPDGMLGNFSEKCFSGNEGLCGSSPLPECSFTTEAPPPVASTLIVPSNPSSLPQTTVVPQDKSHTRKGLGTGAIVAIVVANCVALLVMTSFIVAHFCARDRSSNYIVGSESGKRRSGSSYMSDKKVYANGGADSDDTTTTDRSKLVFFDRRKQFELEDLLRASAEMLGKGSLGTVYKAVLDDGSTVVAVKRLKDTNPCARKEFEQYMDVIGKLKHPNIVKFRAYYYAKEEKLLVYDYLSNGSLHSLIHGNRGPGRIPLDWTTRISLALGAARGLAHIHEEYCAATIPHGNVKSSNILLDKNGVACIADFGLSLLLNPVHAVARLGGYRAPEQADAKRLSQKSDVYAFGVLLLEILTGRAPSQYPASTGLKVDEEEQAVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVAQPENRPTMAEVVKMIEEIRVEQSPIGEEYDESRNSLSPSLANTDDGLV* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01806 676 FunFam Nuclear pore complex protein NUP107 28 183 - -
Pte6g01806 676 Gene3D Ribonuclease Inhibitor 141 221 IPR032675 -
Pte6g01806 676 Gene3D Ribonuclease Inhibitor 30 140 IPR032675 -
Pte6g01806 676 CDD STKc_IRAK 371 646 - -
Pte6g01806 676 ProSiteProfiles Protein kinase domain profile. 365 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01806 676 SUPERFAMILY L domain-like 30 211 - -
Pte6g01806 676 Pfam Protein kinase domain 369 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01806 676 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 442 656 - -
Pte6g01806 676 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 16 649 IPR046959 -
Pte6g01806 676 FunFam pollen receptor-like kinase 1 335 441 - -
Pte6g01806 676 MobiDBLite consensus disorder prediction 653 676 - -
Pte6g01806 676 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Pte6g01806 676 Gene3D Phosphorylase Kinase; domain 1 334 441 - -
Pte6g01806 676 Gene3D Transferase(Phosphotransferase) domain 1 442 666 - -
Pte6g01806 676 SUPERFAMILY Protein kinase-like (PK-like) 369 644 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01806 Pte-Chr6 35031146 35033480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01806 27 672 Receptor kinase-like Gene Family AT2G36570 66.917 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte6g01806 Pkinase 2.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01806 - - qsa:O6P43_009504 1016.91