Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01794 ATGTCAAAATTTAGAAAAAGTTACGATAACTATATTATGCTTGTGAGCTTTGAGTACACTTTCGAGACACAATCTAATGGTGTAGTGATCACTTCAAAATCTTCATGCAAGGGAGCAAGGAAATGGTCTTTTTTTGGAGCTTTGATTGCTGAGTTCATTGCTACTTTGCTTTTTCTGTATATCACTGTCCTTACTGTCATTGACTACAAAGAGAAGACTGATACTCACATTCATGGCGACGCTTTTGGTGGGGTTGGTCTCCTTACATTGTTTGGGCTTTCGGTGGTATGA 291 0.3849 MSKFRKSYDNYIMLVSFEYTFETQSNGVVITSKSSCKGARKWSFFGALIAEFIATLLFLYITVLTVIDYKEKTDTHIHGDAFGGVGLLTLFGLSVV* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01794 96 PRINTS Major intrinsic protein family signature 46 65 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g01794 96 PRINTS Major intrinsic protein family signature 91 96 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g01794 96 Pfam Major intrinsic protein 40 78 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g01794 96 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 39 88 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01794 Pte-Chr6 34979127 34979636 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01794 40 90 Major Intrinsic Protein MIP AT2G39010 62.745 2.60e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01794 K09872 - ming:122067471 66.2402