Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01790 ATGTTAATACCCCCATGGCTAGAGACATTGCTGAGCACTTCATTCTTCAATGTTTGTCGTACTCATGGAGATGCCGCCAGAAGTGAGTGTAATATGTTTTGCTTGGACTGCAGTGGCGAAGCCTTCTGCTTTTATTGCCGTTCATCGAGGCACAAGGATCATCAGGTCATTCAGATAAGAAGGTCTTCATACCATGATGTTGTACGGGTTTCCGAAATTCAGAAAGTGCTGGATATCACTGGAGTTCAGACTTACGTCATCAACAGTTCTAGAGTTCTGTTTCTGAATGAGAGGCCTCAACCAAAATCCGGGAAAGGAGTACCTCACGTTTGTGAAATCTGTAGAAGAAGTCTTTTGGACCCATTTCGTTTCTGTTCTTTGGGATGTAAGCTCGTAGGTGTGAAGAGAAATGGGGATGTGAGCTTTTGTTTAGATGCTAATAATGAGGCAATGGCAATGGAAAGAAATGAACTGAGCATATCAAGGTCTTCAAGGCGCCGAGAAGAAGAATTGCGTGAAGGCTCACAAAAGGACATGTGCCCGCCTACTCCTCCTCCACCTTCTTCAAGTGCAAGGAGAAGAAAAGGCATTCCCCATCGTGCTCCTTTTGGTTCCTAG 618 0.4482 MLIPPWLETLLSTSFFNVCRTHGDAARSECNMFCLDCSGEAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVSEIQKVLDITGVQTYVINSSRVLFLNERPQPKSGKGVPHVCEICRRSLLDPFRFCSLGCKLVGVKRNGDVSFCLDANNEAMAMERNELSISRSSRRREEELREGSQKDMCPPTPPPPSSSARRRKGIPHRAPFGS* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01790 205 MobiDBLite consensus disorder prediction 159 176 - -
Pte6g01790 205 Pfam PLATZ transcription factor 60 131 IPR006734 -
Pte6g01790 205 SUPERFAMILY B-box zinc-binding domain 16 61 - -
Pte6g01790 205 Gene3D Classic Zinc Finger 14 78 - -
Pte6g01790 205 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 4 203 - -
Pte6g01790 205 MobiDBLite consensus disorder prediction 157 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01790 Pte-Chr6 34964582 34966451 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pte6g01790 PLATZ 5.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01790 - - gmx:100809455 343.584