Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01775 ATGCTTACAATTGTAGAACAAGTGAAGGGTAGGAATGGAAGCCTTTTAGTGGAGAAGAGCTACAGAGGAGTGAGGAAGAGGTCATGCGGGAGGTGGTCAGTGGAGATATGTGATAGAATTGCTAAGGAGGCAGCACAAGCTTATGATGCAGCTGCAAGGCAGTTGAGATATTCAAAAGCTAAGACAAACTTTGAGATACCTTCAGTGCTTCCCTTTTCTTCACCTTCTACTTCTTCATCCTCAGATGTCAAAATGGTGAGTGGCAGTAGTTCTAGGAAGTCTAAAATTGCCAAAAACAGCAGAAAATGTAAAGTTGTCAACTCTATAGCTTAG 333 0.4204 MLTIVEQVKGRNGSLLVEKSYRGVRKRSCGRWSVEICDRIAKEAAQAYDAAARQLRYSKAKTNFEIPSVLPFSSPSTSSSSDVKMVSGSSSRKSKIAKNSRKCKVVNSIA* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01775 110 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 20 91 - -
Pte6g01775 110 SMART rav1_2 20 71 IPR001471 GO:0003700|GO:0006355
Pte6g01775 110 MobiDBLite consensus disorder prediction 72 100 - -
Pte6g01775 110 Gene3D AP2/ERF domain 19 66 IPR036955 GO:0003700|GO:0006355
Pte6g01775 110 ProSiteProfiles AP2/ERF domain profile. 20 65 IPR001471 GO:0003700|GO:0006355
Pte6g01775 110 MobiDBLite consensus disorder prediction 72 94 - -
Pte6g01775 110 SUPERFAMILY DNA-binding domain 20 65 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01775 Pte-Chr6 34858649 34859017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01775 18 68 AP2-EREBP Transcription Factor Family AT5G44210 49.206 5.15e-12 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01775 - - cave:132188012 83.5741