Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01767 ATGGCGACGTACTTTCATGGCAATTCAGAAATCCAAGCAACCGATGGTCTTCAAACTCTTGTACTCATGAATCCCGGCTTCATCCAATACTCTGACACGCCGCCGCCGCATGGCAGCAACCTTGTTTTCCTCAACTCCGCTCATACCATCAACTCACTAAATCAACAAAACCTCTCCCACGCGCCTCCCGCTCACATGCAGCAGTATGTCGGTATCCCTCTTCAAACAGCTGCATCCCAAGACTCTAACTACCCCGTAGCTCACCCCCAACTGGACGTTGCTGCGTTGCATGGGTTTGCTCCAAGCATGCAGTACAACCTTTGGAACACAATCGATCAAGGTACGGCGGCGCGTGATACGCCACGCGTTCAGCGAGGACTGTCTTTAAGTCTTTCTTCCCAGCAGGCCGGGTATGGGTCTTTCCGGGTTGATCGCGAAGGAGCTTCACAAGCTCAGGGTCCCGTGATGTCTGGAGATGACGTGCGTGTGTCAGGTCGGTCGTCATCATCGGCTTCCGGGGTTACCAATGGGATTTCTGGTATGCAGAGTGTTCTTCCCTTGAGCTCAAAGTACCTGAAAGCAGCACAGGACCTGTTAGATGAGGTTGTCAATGTCAATAATGGAAACTTCGGTAGCAAGACTGCATTCGGTAAGAAGAGTACAAGTGCACAGAACAAGTTGATGGGGGAGTTTTCTACTGCTGCAAGTGGAGATCCCTCATCTGGCGGGGAGGCAAGAGTGAAGCCTTGCAGTGAGCTGTCAACTGCAGAGAGACAGGAAATTCAGATGAAGAAGGCAAAGTTAATCAATATGCTTGATGAGGTGGAACAAAGGTACCGGCAGTACCACAATCAAATGCTGATTGTGATATCTTCGTTTGAACAAGCCGCTGGAATTGGCTCTGCAAGGACATACACTGACCTTGCACTACAAACAATCTCGAAGCAGTTTCGTTGCTTGAAGGATACAATAACTGGACAAATAAAAGCTGCCAACATGAGCCTTGGCGAAGAAGATTGCCTGCTTGGGGGCAGAACTGAAGGTTCACGGCTGAAATTTGTGGACAATCATTTTAGGCAACAACGAGCTCTTCAGCAGTTGGGAATGATTCAGCACAATGCTTGGAGACCCCAGAGAGGATTGCCCGAACGATCCGTTTCTGTTCTTCGTGCTTGGCTTTTTGAACACTTCCTTCATCCTTATCCAAAGGACTCAGACAAACATATGCTTTCTAAACAAACAGGTCTTACTAGAAGCCAGGTGTCTAATTGGTTCATTAATGCGCGAGTTCGGTTATGGAAACCAATGGTGGAAGAGATGTATATGGAGGAAATGAAGGAGCTGGAACAGAATGGATCACAAGAAAAAACAAGCAAGAGCAGTGAAGCTATTACTCCGAAGTACGATGCCCCACGAGACAAAATTGGTGGGACTGATAATCAACCTAGGAGCTTCAGTTCTAAACATGACAACTCCATAAACCAGAACTCACCAACCACTGGTTCTGTTCCAAAAGCATCGCCATCCACGTCTCCAGTTGCTGGAAATGCTCGTAACCAATCAGGATTTAGTCTTATTGGATCGTCTGAGTTAGACGGGATCACTCAAGGTAGTCCCAAAAAACCGAGGCACCACGCAATGCTGCATTCCCAAAATGACGCAGACGAGGATTCCATGTCAATAAAGTTTGGAGATGAAAGGCAGAGTAGAGATGGCTACTCATTCATGGGAAGCCAAAGTAACTTAATTGCAGGTTTTGGGCAGTACCCAATTGGTGAAATTGGAAGGTTTGATGCAGAGCCATTCACGTCTAGCTTTTCTGGTAATGGTGTATCACTCACACTTGGTCTTCCACACTGTGATAACCTTTCCCTGTCAGGAGCACACCAAACATTTCTCTCCAATCAGAACATGCAACTTGGACGAAGAGTGGATATCAGTGAAGCAAATGAGCTTGATGCCATGAGTCCATCTGCACCTCATTCTTCATCCATGTATGAAAATATGAATTTTTGCAGCACAACCATTGCCTGA 2034 0.471 MATYFHGNSEIQATDGLQTLVLMNPGFIQYSDTPPPHGSNLVFLNSAHTINSLNQQNLSHAPPAHMQQYVGIPLQTAASQDSNYPVAHPQLDVAALHGFAPSMQYNLWNTIDQGTAARDTPRVQRGLSLSLSSQQAGYGSFRVDREGASQAQGPVMSGDDVRVSGRSSSSASGVTNGISGMQSVLPLSSKYLKAAQDLLDEVVNVNNGNFGSKTAFGKKSTSAQNKLMGEFSTAASGDPSSGGEARVKPCSELSTAERQEIQMKKAKLINMLDEVEQRYRQYHNQMLIVISSFEQAAGIGSARTYTDLALQTISKQFRCLKDTITGQIKAANMSLGEEDCLLGGRTEGSRLKFVDNHFRQQRALQQLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLSKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEMKELEQNGSQEKTSKSSEAITPKYDAPRDKIGGTDNQPRSFSSKHDNSINQNSPTTGSVPKASPSTSPVAGNARNQSGFSLIGSSELDGITQGSPKKPRHHAMLHSQNDADEDSMSIKFGDERQSRDGYSFMGSQSNLIAGFGQYPIGEIGRFDAEPFTSSFSGNGVSLTLGLPHCDNLSLSGAHQTFLSNQNMQLGRRVDISEANELDAMSPSAPHSSSMYENMNFCSTTIA* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01767 677 Pfam Associated with HOX 188 325 IPR006563 -
Pte6g01767 677 SUPERFAMILY Homeodomain-like 376 442 IPR009057 -
Pte6g01767 677 MobiDBLite consensus disorder prediction 447 556 - -
Pte6g01767 677 SMART HOX_1 375 439 IPR001356 GO:0003677
Pte6g01767 677 FunFam BEL1-like homeodomain protein 9 378 440 - -
Pte6g01767 677 ProSiteProfiles 'Homeobox' domain profile. 372 435 IPR001356 GO:0003677
Pte6g01767 677 Coils Coil 258 285 - -
Pte6g01767 677 Gene3D - 370 448 - -
Pte6g01767 677 SMART prehox3 179 326 IPR006563 -
Pte6g01767 677 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 77 460 - -
Pte6g01767 677 MobiDBLite consensus disorder prediction 147 175 - -
Pte6g01767 677 Pfam Homeobox KN domain 392 431 IPR008422 GO:0003677|GO:0006355
Pte6g01767 677 MobiDBLite consensus disorder prediction 479 535 - -
Pte6g01767 677 CDD homeodomain 375 435 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01767 Pte-Chr6 34793518 34797941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01767 1 651 Homeobox Transcription Factor Family AT2G35940 48.401 5.55e-163 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pte6g01767 POX 2.8e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01767 - - qsa:O6P43_006028 944.11