Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01751 ATGTTTTTCATTTGTTTTCATGATGTCTTTCTGTTAGATGTTCTTGAGACTCAATGCATCTTATTGCTCATACAATGCACTCGTTTCATTTCGTTAGGTGAAAGATTCACTGATGTAGTGGGGAGTCCTTATTATGTGGCCCCTGAAGTTTTACAGAAGCACTATGGTCCAGAATGTGATGTCTGGAGTGTTCGCGTGATCATTTACATTTTGTTGTGTGGAGTTCCTCCATTCTGGGATGGTGAGACTCTTGTAATTGCAGAAAATCTTTCTGAAGAAGAAATTGCTGGGCTAAAAGAGATGTTTAAGATGATAGATGCGGATGACAGTGGACAGAGCACTCTTGAGGAACTGAAAAATGGTTTGGGAAAAGTCGATTCTGACCTTTGGGAATCTGAAATTATTGCGTTGATGCAAGCGGCAGACGTTGATAACAGTGGTAACATAGACTATGGCGAATCCATTGCAGCAATGCTTCATCAGAACAAAATCCAGAAGGAGGATCACCTATTTGCAGCCTTCCCTTATTTTGACAAAGATGGAAGTGGCTACATCACACGAGATGAGCTCCAACAAGTCTGCCAGCAATTTGGCTTGGAGGAAGATCATCTAGACGAAATAATATGTGAAGCTGACAAAAACAACGACGGGCGTATTGATTACAATGACTTTGTTGCCATGATGCGAGATACAGGGTTTAGTCAGAGGCTTTCATGA 717 0.4128 MFFICFHDVFLLDVLETQCILLLIQCTRFISLGERFTDVVGSPYYVAPEVLQKHYGPECDVWSVRVIIYILLCGVPPFWDGETLVIAENLSEEEIAGLKEMFKMIDADDSGQSTLEELKNGLGKVDSDLWESEIIALMQAADVDNSGNIDYGESIAAMLHQNKIQKEDHLFAAFPYFDKDGSGYITRDELQQVCQQFGLEEDHLDEIICEADKNNDGRIDYNDFVAMMRDTGFSQRLS* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01751 238 Gene3D - 96 163 - -
Pte6g01751 238 SUPERFAMILY Protein kinase-like (PK-like) 32 95 IPR011009 -
Pte6g01751 238 ProSiteProfiles EF-hand calcium-binding domain profile. 165 198 IPR002048 GO:0005509
Pte6g01751 238 FunFam Calmodulin 1 87 231 - -
Pte6g01751 238 Pfam Protein kinase domain 30 98 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01751 238 Pfam EF-hand domain pair 168 229 IPR002048 GO:0005509
Pte6g01751 238 PANTHER SERINE/THREONINE-PROTEIN KINASE 29 80 - -
Pte6g01751 238 SUPERFAMILY EF-hand 89 228 IPR011992 -
Pte6g01751 238 ProSiteProfiles EF-hand calcium-binding domain profile. 199 234 IPR002048 GO:0005509
Pte6g01751 238 SMART efh_1 203 231 IPR002048 GO:0005509
Pte6g01751 238 SMART efh_1 133 161 IPR002048 GO:0005509
Pte6g01751 238 SMART efh_1 169 197 IPR002048 GO:0005509
Pte6g01751 238 SMART efh_1 97 125 IPR002048 GO:0005509
Pte6g01751 238 ProSiteProfiles EF-hand calcium-binding domain profile. 93 128 IPR002048 GO:0005509
Pte6g01751 238 ProSitePatterns EF-hand calcium-binding domain. 212 224 IPR018247 -
Pte6g01751 238 Gene3D - 164 237 - -
Pte6g01751 238 ProSiteProfiles Protein kinase domain profile. 1 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01751 238 CDD EFh 169 229 IPR002048 GO:0005509
Pte6g01751 238 Gene3D Transferase(Phosphotransferase) domain 1 13 95 - -
Pte6g01751 238 Pfam EF-hand domain pair 114 161 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01751 Pte-Chr6 34694045 34696107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01751 85 235 EF-hand Containing Proteins AT2G38910 74.172 1.23e-72 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte6g01751 Pkinase 6.2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01751 K13412 - aew:130795383 241.506