Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01740 ATGAGAGGTAGGAGTTACAGTTACAGTCCCTCTCCCCCTCCAAGGGGATACAACAGGAGATATCGCAGCCCAAGCCCAAGGGGTCGATATGGAGGACGTGACAGAGATCTGCCAATAAGTCTCTTGGTGCGTAACCTCCATCGTGACACAAGGACTGAAGATCTTCGTGGACCATTTGGACAGTTTGGACATCTCAAGGACATATATCTGCCTCGGGATTACTACACAGGGGAGCCTCGTGGTTTTGGTTTTGTCCAATATGTGGACCCAGCTGATGCTGCTGATGCCAAATATCACATGGATGGTCAAATCCTCCTTGGTCGTGAACTAACTGTAGTATTTGCTGAGGAGAATAGGAAAAAACCTTCTGAAATGAGGGCAAGACAACGGGGGAGGAGCCGCTATGATCGGCGATCCCCCTATTATCACTATTCTCGCTCCCCAGTCTATGGCCAAACTTACTCATACAGTCCAGATTACACCCCTTCTCCCAGGAGAGGAAGACATTATTCCAGGTCATATTCACCTAGCGAGAGAAGGTATAGATATAGAGATAGATCGTATTCAAGCTCGCCACATGGATCAAGGATGCGTAGCCGCAGGAGGAGTTTTAGTAGGAGCAGGAGTCGCAGTCTAGAGTACTCTTAG 648 0.4861 MRGRSYSYSPSPPPRGYNRRYRSPSPRGRYGGRDRDLPISLLVRNLHRDTRTEDLRGPFGQFGHLKDIYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPSEMRARQRGRSRYDRRSPYYHYSRSPVYGQTYSYSPDYTPSPRRGRHYSRSYSPSERRYRYRDRSYSSSPHGSRMRSRRRSFSRSRSRSLEYS* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01740 215 MobiDBLite consensus disorder prediction 146 160 - -
Pte6g01740 215 MobiDBLite consensus disorder prediction 119 141 - -
Pte6g01740 215 Gene3D - 33 142 IPR012677 -
Pte6g01740 215 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 39 117 IPR000504 GO:0003723
Pte6g01740 215 SUPERFAMILY RNA-binding domain, RBD 40 144 IPR035979 GO:0003676
Pte6g01740 215 SMART rrm1_1 40 113 IPR000504 GO:0003723
Pte6g01740 215 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 39 210 - -
Pte6g01740 215 MobiDBLite consensus disorder prediction 171 191 - -
Pte6g01740 215 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 41 110 IPR000504 GO:0003723
Pte6g01740 215 MobiDBLite consensus disorder prediction 1 35 - -
Pte6g01740 215 MobiDBLite consensus disorder prediction 119 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01740 Pte-Chr6 34608677 34611889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01740 43 128 Eukaryotic Initiation Factors Gene Family AT4G34110 31.395 7.35e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01740 K12900 - pvy:116140927 208.764