Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01730 ATGACTCTCGGCGATGACGCAGGCCAGCAGAGGACACAAGCACAATCGGAGGAAGTGATTAAAGCTCCAGAGCGGAGCGGTATCCCGCGTAACACACAAACAGTTTTGTATGATTGCAGTGGGAGAGGAGAGCCAAAAGGTTCAAATGTTATAAAAGCTAGAACCGCACCATTGACTGCTAACTTCGGTTCAAATGTTTTGATTGGAGAAGGCTCTTATGGCCGGGTTTTCTATGCGAAGATGGAAGATGATCAGCCTGTAGCAATTAAGAAGCTGGATACAAGTACTACACAAGAACCAGATGCTGATTTTGCAGCTCAATTATCTGTAGTTTCAAGTCTAAAGCATGCACATTTCTTGGAATTGCCTGGATATTGTCTCGAAGCAAACAGCCAGATTTTGGTATTTCAATGTGTCGAGAAGGGTTTCTTGCATGATATATTACACGCAAAAGGCCTTGAATTCCTGCATGAAAAGGTTCAGCCTTCCATAGTTCATCGCGATATCAGATCCAGCAATGTGCTAGTGTTCAATGATTTCGATGCGAAGATTGCATATTTCAATTTGTCAAATCAGTCTTCAGACACTGGAGCTCGGCTGCATTCAACAAGAATTCTGGGAACATTTGGCTACCATGCTCCAGAGTATGCCTTAGTATTCTTTTTTCTCCTAAAATTTGTACTGGCATTGATTCATGTACTGAGAATAACGAATAACCGACATTTAGAACCAAACTAG 738 0.4214 MTLGDDAGQQRTQAQSEEVIKAPERSGIPRNTQTVLYDCSGRGEPKGSNVIKARTAPLTANFGSNVLIGEGSYGRVFYAKMEDDQPVAIKKLDTSTTQEPDADFAAQLSVVSSLKHAHFLELPGYCLEANSQILVFQCVEKGFLHDILHAKGLEFLHEKVQPSIVHRDIRSSNVLVFNDFDAKIAYFNLSNQSSDTGARLHSTRILGTFGYHAPEYALVFFFLLKFVLALIHVLRITNNRHLEPN* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01730 245 ProSitePatterns Protein kinases ATP-binding region signature. 68 91 IPR017441 GO:0005524
Pte6g01730 245 ProSiteProfiles Protein kinase domain profile. 62 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01730 245 SMART tyrkin_6 62 234 IPR020635 GO:0004713|GO:0006468
Pte6g01730 245 ProSitePatterns Tyrosine protein kinases specific active-site signature. 164 176 IPR008266 GO:0004672|GO:0006468
Pte6g01730 245 Gene3D Transferase(Phosphotransferase) domain 1 140 221 - -
Pte6g01730 245 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 150 218 - -
Pte6g01730 245 Pfam Protein kinase domain 66 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01730 245 MobiDBLite consensus disorder prediction 1 19 - -
Pte6g01730 245 SUPERFAMILY Protein kinase-like (PK-like) 59 220 IPR011009 -
Pte6g01730 245 Gene3D Phosphorylase Kinase; domain 1 50 137 - -
Pte6g01730 245 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01730 Pte-Chr6 34494908 34497829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01730 59 225 Receptor kinase-like Gene Family AT4G02010 36.842 4.94e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Pte6g01730 Pkinase 4.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01730 - - qsa:O6P43_005819 253.062