Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01723 ATGGCGGAAACCGAGGACATTCAACCCCTTGTTTGTGACAATGGAACTGGAATGGTCAAGGCTGGATTTGCTGGAGATGATGCTCCTAGAGCTGTATTCCCTAGCATTGTAGGCCGTCCTCGCCACACTGGTGTGATGGTGGGTATGGGACAGAAGGATGCGTATGTTGGGGATGAAGCTCAATCAAAGAGAGGTATTTTGACTTTGAAATACCCAATTGAGCATGGAATTGTGAGCAACTGGGACGACATGGAGAAGATCTGGCATCATACTTTCTATAATGAGCTTCGTGTTGCTCCCGAAGAACATCCTGTTCTCCTCACAGAAGCCCCTCTGAATCCCAAGGCCAATCGTGAGAAAATGACCCAAATCATGTTTGAGACCTTTAACACACCAGCCATGTATGTAGCGATTCAGGCCGTCCTTTCCCTATATGCCAGTGGCCGTACAACTGGTATTGTCTTGGACTCTGGTGATGGTGTCAGTCACACAGTTCCTATCTACGAAGGTTATGCCCTCCCACATGCAATCCTGCGTTTGGATCTGGCAGGTCGTGATCTGACTGATGCCCTTATGAAAATCTTGACCGAGCGTGGATACTCTTTCACCACCACTGCTGAGCGTGAAATTGTGAGAGACATGAAGGAGAAGTTAGCTTACATTGCTCTTGACTTTGAACAAGAGCTGGAGACAGCAAAGACCAGCTCTGCCGTGGAGAAGAGCTACGAGCTACCTGATGGGCAGGTAATCACCATTGGTGCTGAGAGGTTCCGCTGTCCCGAAGTACTCTTCCAGCCATCCATGATCGGAATGGAAGCTGCTGGCATCCACGAAACTACTTACAATTCTATCATGAAGTGTGATGTCGACATTAGGAAGGATCTGTACGGCAACATTGTTCTCAGTGGTGGTTCAACCATGTTTCCGGGCATTGCTGATAGGATGAGCAAGGAAATTACAGCATTGGCACCCAGTAGCATGAAAATTAAGGTGGTTGCCCCACCAGAGAGAAAGTACAGTGTCTGGATTGGAGGGTCTATCCTGGCATCTCTTAGCACTTTCCAACAGGTATGTCTTCAAGAGTTTGATAAAGAAAATGTGATAAAGATTCAGTCAAACTATGATAGTATGTTTACTGTTTTCAATCCCATTGGATTCTATGTAATATTTCCGCTCAGTTTTACTTGTCTATATTTCTCCGTTTGTTGA 1209 0.4615 MAETEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDFEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVCLQEFDKENVIKIQSNYDSMFTVFNPIGFYVIFPLSFTCLYFSVC* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01723 402 SUPERFAMILY Actin-like ATPase domain 149 359 IPR043129 -
Pte6g01723 402 FunFam Major actin 260 340 - -
Pte6g01723 402 ProSitePatterns Actins signature 1. 55 65 IPR004001 -
Pte6g01723 402 FunFam Actin, muscle 182 273 - -
Pte6g01723 402 SUPERFAMILY Actin-like ATPase domain 6 155 IPR043129 -
Pte6g01723 402 PRINTS Actin signature 63 85 IPR004000 -
Pte6g01723 402 PRINTS Actin signature 28 37 IPR004000 -
Pte6g01723 402 PRINTS Actin signature 117 130 IPR004000 -
Pte6g01723 402 PRINTS Actin signature 142 161 IPR004000 -
Pte6g01723 402 PRINTS Actin signature 51 62 IPR004000 -
Pte6g01723 402 PRINTS Actin signature 238 254 IPR004000 -
Pte6g01723 402 FunFam Actin, alpha skeletal muscle 3 176 - -
Pte6g01723 402 PANTHER ACTIN 9 365 IPR004000 -
Pte6g01723 402 Pfam Actin 5 359 IPR004000 -
Pte6g01723 402 Gene3D - 10 360 - -
Pte6g01723 402 SMART actin_3 7 378 IPR004000 -
Pte6g01723 402 Gene3D Actin; Chain A, domain 4 182 273 - -
Pte6g01723 402 ProSitePatterns Actins and actin-related proteins signature. 106 118 IPR020902 -
Pte6g01723 402 CDD NBD_sugar-kinase_HSP70_actin 10 183 - -
Pte6g01723 402 Gene3D - 140 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01723 Pte-Chr6 34423969 34426465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01723 1 364 Cytoskeleton Gene Families AT5G09810 94.262 0.0 718
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01723 K10355 - jre:109011951 711.064