Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01722 ATGCTTTCGTGGCTAATAAGGATTGTATCTGCTTGCTGGAAACCAGTCAGGCAATATGCCCGTATGAACAAGGATGACGGTTCTGACGATTCGTCAACCACTGAAGAAGACTCTCTACTTTGGTACAAGGATCTTGAGAAGCACTCATGTGGTGAATTTTCTTTCGCTGTTGTTCAGGCCAACAGCGTCATTGAGGATCAAAGTCAAGTCGAGACTTGCCCTCGCGCCACCTTCATCGGAGTCTACGACGGTCATGGCGGCCCAGATGCTGCTCGCTTCGTTTCTAACAATCTATTTCGTCATCTAACAAGAATTGCCCAAGAAAATGGAACTATATCTGAAGATATTCTTAGACGTGCTGTTTCCGCAACAGAGGACGGTTTTCTCACTTTGGTTAGGAGGACTTGGGGCATAGAACCATTGGTTGCAGCAGTTGGGTCATGCTGTCTAATCGGACTCATTTGGAAAGGAACAGTATATGTTGCCAACCTAGGAGATTCACGTGCTGTACTAGGTTGTTTAGGTAGATCTAATACAATTTTGGCAGAGCAATTGACCAAAGAGCACAATGCTAGTCAGGAGGAGGTTAGACGAGAACTCAAGTCTTTGCATCCAGAAGATTCACAAATTGTTGTCTTGAAGCAGGGTACCTGGCGTGTTAAAGGCATTATTCAGGTATCCAGATCTATAGGCGATGCGTACTTGAAGACACCCGAATTTCATTTTGGTCCATCAGTCCCACGATTCCACTTATCTGAACCAATCCGTCGGCCTGTGTTGACTGCAGAACCATCTATATGTACGCGAGTTTTGCAACCAAATGATAGATTTCTCATATTTGCATCAGATGGACTTTGGGAGCACATGACAAACAAAGAAGCTGTAGAGATTGTTCATAATAACTCCCGAGCCGGTATTGCTAAAAGGCTCATCACAACAGCTTTAAGTGCGGCAGCTAGCAAGAGAGAGATGAGATACCAAGACCTTAAGACTGTTGAGAAGGGGACCAGGCGGCACTTTCATGATGATGTTACGGTTATCGTAATCTTTATAGACCATGAATTGCTGGGACAAAATCCTTCAGTGGCAGAGCTATCGATCAGAGGGTTTGTTGACGCTGTTGACCCATCAGAAAACTTCGAAGCTCTTAGGAGCTTGGCTTAA 1164 0.4485 MLSWLIRIVSACWKPVRQYARMNKDDGSDDSSTTEEDSLLWYKDLEKHSCGEFSFAVVQANSVIEDQSQVETCPRATFIGVYDGHGGPDAARFVSNNLFRHLTRIAQENGTISEDILRRAVSATEDGFLTLVRRTWGIEPLVAAVGSCCLIGLIWKGTVYVANLGDSRAVLGCLGRSNTILAEQLTKEHNASQEEVRRELKSLHPEDSQIVVLKQGTWRVKGIIQVSRSIGDAYLKTPEFHFGPSVPRFHLSEPIRRPVLTAEPSICTRVLQPNDRFLIFASDGLWEHMTNKEAVEIVHNNSRAGIAKRLITTALSAAASKREMRYQDLKTVEKGTRRHFHDDVTVIVIFIDHELLGQNPSVAELSIRGFVDAVDPSENFEALRSLA* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01722 387 Gene3D - 25 359 IPR036457 -
Pte6g01722 387 Coils Coil 182 202 - -
Pte6g01722 387 Pfam Protein phosphatase 2C 71 319 IPR001932 -
Pte6g01722 387 PANTHER PROTEIN PHOSPHATASE 35 349 IPR015655 GO:0004722|GO:0006470
Pte6g01722 387 ProSiteProfiles PPM-type phosphatase domain profile. 52 351 IPR001932 -
Pte6g01722 387 ProSitePatterns PPM-type phosphatase domain signature. 78 86 IPR000222 GO:0043169
Pte6g01722 387 FunFam Probable protein phosphatase 2C 42 43 359 - -
Pte6g01722 387 SUPERFAMILY PP2C-like 58 352 IPR036457 -
Pte6g01722 387 CDD PP2Cc 53 351 IPR001932 -
Pte6g01722 387 SMART PP2C_4 46 349 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01722 Pte-Chr6 34420425 34423058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01722 1 378 PP2C-type Phosphatase Gene Family AT5G06750 63.307 4.83e-177 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01722 K01102 - qsa:O6P43_005836 603.208