Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01713 ATGAACCATCTCCCCAAACATAGATTAGCATTTGCTATCAAATGGATTTCCTCAAAATTTTCTGACAATGATACCGTGCCATCAAAATCCCAACTGGGATTTATTGGGTGCTGGTTCCATATTGTACAAAAACCTAATCTTTACAGCACAGCAGCTCTTGCTCGACATCCGGTTGCTGCTTCCAGAGTAAGCAGTAAAGCTCTGTCCAAATTGAATGAAAATGAAGCCCAAGCTGCTTTATTAGAATATCTACATTCCACTAGAAGCCTGCTGTTTCTGGATGCAGAGCACATGAGTAAGAATTCCCCGGCTTTCGTAAAGCAGCTTCTGAAGAAAGTTGATCGTGAGGAGGATATTAGGCGATCTCTTACTCGCTTCTTGCGTTACCATCCCATCAATGAATTTGAACCCTTTTTTGAAAGCGTCGGCTTGAAGTATCCAGAGTATGCTTCTCTCCTTCCACGTGGTTTGATTTTCTTAAGTGATGACGAGCTTTTGCTGGACAACTATCACGTCCTATGCGAATATGGGATTGATAGAAATAAGATAGGCAAGATTTTTAAGGAAGCAAATGAAGTTTTTCGATATGACTATGGAGTATTACAGTCAAAGCTTCGAGCTTGTGAAAAACTTTTCCCTGACAGATCATGTCTGTCGAAATTTATTGCTGCTAGTCCACGCCTCCTGATTGGCGACGTTAATGTCAAAATTCCGAAGGCATTAGCAAAATTTAGTGATTTGGGATTTGGCGTTGGTTGGATTGAGGAACAATTAATGGAGGAGAGTTCTTATAATTGGAACCAAATGCTTGAACTTCTTTGCTTGTTTGGTGAGATTGGTTTCAGTGATGAGCTGTTGAGAAAATTAATCAGGCAGCACCCAGATCTCTTGTTTGAGGATTCTGGAAGAAGGACTTCCTCTCTCATTGGATTGCTATTTAAATTTGGATTGTCAAAGGGACAATTATACTCCATTTTTCTGCAGTTTCCGCAAACTCAGGTTGGCAAATTCCTTTCAAATTTAAGAAACTGTTTGCTCTTCCTAGACGAAATTGAGATGGAACTTCCGGAGATCAGGAAGCTTGTTCATTCTGAAGCCTTGCTCTTGGGATCATGCATGTTGAAGAAAGCCAACAGTTTACTGAATAACTTAAATGCTGGAAAGAAGCGGCTTTGCCAATTAGTTCAGGAAAATCCAAAAGAAATGGCAAATTGGGTTCTAGGAGCTAGAGTTAATCCATTGCCTAATTCAGGTGAATCTAAGGAATCACGAAGGCAGAAGATTGAGTTCTTGTTGAGTTTGGGGTTTGCAGAGAATTCATTAGATATTGAAAAACAGCTGAAGCTCTTTCGGGGCAACGGAGTGGAGCTTCAAGAGAGACTCAATTGCATTGTTCAAGCTGGTCTTGATCCGGAGGATGTGTATGAAATGGTTAAAACGTCTCCTCAGATACTTAACCAGAAACAGAGTGTGATCAAAATGAAGCTAGATTTTCTAGTAAATGAAATGGGATATCCTATATCTTCTTTGGTGAACTTCCCATCTTATCTAAGCTATACTATTCAGAGAGTCAATCTTAGGTTATCAATGTACAATTGGCTCAAAGATCGGGGAGCTGCAGCACCTAATCTGGCATTGAGCACTTTACTTGCTTGTGCAGAGAAAATATTCATAGGTCAATATGTCAACCATCATTCTAGTGGTCCTCAAGTTTGGCAAGATTTGAAGGAAAAAATTTGTTCAGAGAAATAA 1752 0.3984 MNHLPKHRLAFAIKWISSKFSDNDTVPSKSQLGFIGCWFHIVQKPNLYSTAALARHPVAASRVSSKALSKLNENEAQAALLEYLHSTRSLLFLDAEHMSKNSPAFVKQLLKKVDREEDIRRSLTRFLRYHPINEFEPFFESVGLKYPEYASLLPRGLIFLSDDELLLDNYHVLCEYGIDRNKIGKIFKEANEVFRYDYGVLQSKLRACEKLFPDRSCLSKFIAASPRLLIGDVNVKIPKALAKFSDLGFGVGWIEEQLMEESSYNWNQMLELLCLFGEIGFSDELLRKLIRQHPDLLFEDSGRRTSSLIGLLFKFGLSKGQLYSIFLQFPQTQVGKFLSNLRNCLLFLDEIEMELPEIRKLVHSEALLLGSCMLKKANSLLNNLNAGKKRLCQLVQENPKEMANWVLGARVNPLPNSGESKESRRQKIEFLLSLGFAENSLDIEKQLKLFRGNGVELQERLNCIVQAGLDPEDVYEMVKTSPQILNQKQSVIKMKLDFLVNEMGYPISSLVNFPSYLSYTIQRVNLRLSMYNWLKDRGAAAPNLALSTLLACAEKIFIGQYVNHHSSGPQVWQDLKEKICSEK* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01713 583 Gene3D Transcription termination factor 3, mitochondrial 131 302 IPR038538 -
Pte6g01713 583 Gene3D Transcription termination factor 3, mitochondrial 303 574 IPR038538 -
Pte6g01713 583 Pfam mTERF 275 441 IPR003690 GO:0003690|GO:0006355
Pte6g01713 583 Pfam mTERF 424 557 IPR003690 GO:0003690|GO:0006355
Pte6g01713 583 FunFam Transcription termination factor MTEF18, mitochondrial 308 575 - -
Pte6g01713 583 PANTHER CGI-12 PROTEIN-RELATED 217 565 IPR003690 GO:0003690|GO:0006355
Pte6g01713 583 SMART mt_12 219 250 IPR003690 GO:0003690|GO:0006355
Pte6g01713 583 SMART mt_12 507 540 IPR003690 GO:0003690|GO:0006355
Pte6g01713 583 SMART mt_12 287 318 IPR003690 GO:0003690|GO:0006355
Pte6g01713 583 SMART mt_12 475 506 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01713 Pte-Chr6 34352702 34355990 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pte6g01713 mTERF 1.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01713 - - cave:132162560 691.034