Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01709 ATGGGTGTGGGAGGAATAATTTTTACAGTAGGTGGAGTAGCTCTTTTGGTAACAGGGTTGACACTCTTTATAGCTCTTCGCAAGAAAAGAGTGCATGCACGGAAGACCAAGAGATTAACAGGCAGCAATGAGCCGCTGGAGAAACTTCCAGTCAGCGCACAACCAGTGCTTGTCACAGCGGCAGAAAAAAGCCCACAAGCGCCAGCCTTCAATACTCCACCCCTGCCTCCTCCAAGAACGTTGTATCCAGCATCTCGTACCAACACCAATAGGAAGTCGAGAAGAAGCTTTGTGAGAAAATGCAGAATTCCTGAAAAGGCTGAAGTTTACACAGTTGCTGAACTTCAGTCAGCTACCGGCAGCTTCAGTGAACACAATCTTCTAGGAGAAGGATCCCTTGGATCTGTTTACAGGGCTGAGTTTCCAGATGGCCAGGTTTTGGCCGTAAAGAATATCGACATGGTTGGCTTATCACTTAATGAAGAGGAACAGTTTTTGGATCTTATCTGCACTACTTCCCGTCTGAGGCACCCAAATATAGTGTCTCTCAAAGGTTACTGCCTAGAGCATGGACAGCACATACTTGTTTTTGAGTATGTGGGGAACTTATCTCTAGATGATGCTCTTCATAGCAAACCATATAAGCCTCTCTCATGGATTGTCCGTCTAAGGATTGCCCTTGGAGTTGCTCAAGCTTTGGACTATCTGCACCGCAAACTCTCACCACCTGTCGCCCACAGCAACTTGAAGGCTACCAACGTCTTACTTGACGGAGACTTTATGCCACATGTCTGCGACTGCTGTCTTGCTATGTTAAGACCATTAACAAGCAACAGAGTTAAAATCAAAGCTTCTGAGATTGCAATAAGCGACACTGGCTACACTGCCCCAGAACATGGTGAATCAGGAGTCGATAACACCAAAAGCGACATCTATGCCTTCGGAGTGCTGCTTTTGGAATTACTGACGAGAAGGAAACCTTTTGATAATTCAAAGCGAAAAGAGGAGCAATCTCAGGTAAGATGGGCTTCATCCAGACTTCATGATAGGGAGTTCTTAGAGCAGATAGTCGACCCAGACTTGCAAAGGACATTCTCGGCTAAAGAACTCTCTCGTTTTGCTGATATTGTATCACTTTGTGTACAGCCCCTAAAAGAATACAGGCCTCCAATTTCTGCAATTGTGGAATCTCTCACATCTTTGTTACAAAACCACGTCGAGGATACTACTGCAGATGGTGCAAGAAAACTTGATTTGTTCGAAAGACATTCTTTCCGCTCAACAAACACCCGTTTTCTCAGTTCACCTGCGAAGAGTTCCAAATCAGCTCGAGCTGACATCATATGA 1347 0.4521 MGVGGIIFTVGGVALLVTGLTLFIALRKKRVHARKTKRLTGSNEPLEKLPVSAQPVLVTAAEKSPQAPAFNTPPLPPPRTLYPASRTNTNRKSRRSFVRKCRIPEKAEVYTVAELQSATGSFSEHNLLGEGSLGSVYRAEFPDGQVLAVKNIDMVGLSLNEEEQFLDLICTTSRLRHPNIVSLKGYCLEHGQHILVFEYVGNLSLDDALHSKPYKPLSWIVRLRIALGVAQALDYLHRKLSPPVAHSNLKATNVLLDGDFMPHVCDCCLAMLRPLTSNRVKIKASEIAISDTGYTAPEHGESGVDNTKSDIYAFGVLLLELLTRRKPFDNSKRKEEQSQVRWASSRLHDREFLEQIVDPDLQRTFSAKELSRFADIVSLCVQPLKEYRPPISAIVESLTSLLQNHVEDTTADGARKLDLFERHSFRSTNTRFLSSPAKSSKSARADII* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01709 448 ProSiteProfiles Protein kinase domain profile. 122 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01709 448 Pfam Protein tyrosine and serine/threonine kinase 125 398 IPR001245 GO:0004672|GO:0006468
Pte6g01709 448 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 87 199 - -
Pte6g01709 448 PANTHER OS01G0253100 PROTEIN 90 405 - -
Pte6g01709 448 FunFam Leucine-rich repeat receptor-like protein kinase 200 409 - -
Pte6g01709 448 Gene3D Transferase(Phosphotransferase) domain 1 201 422 - -
Pte6g01709 448 Gene3D Phosphorylase Kinase; domain 1 83 199 - -
Pte6g01709 448 MobiDBLite consensus disorder prediction 63 96 - -
Pte6g01709 448 SUPERFAMILY Protein kinase-like (PK-like) 101 398 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01709 Pte-Chr6 34342275 34345173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01709 23 443 Strubbelig Receptor Gene Family AT5G06820 53.991 1.69e-143 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pte6g01709 PK_Tyr_Ser-Thr 5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01709 - - jre:108981755 521.931