Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01705 ATGGCTTACAACATAGATAAAGTTTGTCAGCAATGGACAGGTCATCCAGAAAGTACTCCGCCACCTCAAAACCATAGCCATCTTATTCATCATCAACAGCAACTGCATAAGCATCAAGTTGATTCTTTTGGCATGATGCAATCTTCCTCATCTTCCTCTATCCCTGCAAACTTCATGAGCAAGGATGCCGGAGCTTATGATTTCGGAGAATTAGACTCAGCCCTTTTTTTCTACCTCGATGGACAAGACCCTTCTACTATACAAGAACAAAGACAGAACTCAGGGATGAGGCCACCAACTTTGAACATTTTCCCATCTCAACCTATGCACGTGGAACCACCATCAACAAAGGCTAGTGCGGACTTAGTCTCACCGCTTAACAGTAGCTCCAAGAGACCATCAGAACCGTCAATGGACTTGCCCAACGCAAGAACTGATGCTCCCTCGGAGCCAACCAAAGCTGTCAAGAGAGAGAACCACCGCAAGGGTCCAACATCGAGTTCTGAGCAGGAAGGACCTAAAACACCTGACCCTAAGACACTAAGAAGACTTGCTCAGAATAGGGAAGCAGCTAGGAAAAGCAGGCTTAGAAAAAAGGCATACGTTCAACAACTAGAGTCAAGTAGAATTAAGCTTAATCAGCTCGAGCAAGAGTTACAGCGAGCTAGAGCTCAGGGCATGTTTTATGGAGGGAGTGGTCTTCCAGGGGATCAACAAGGTCTTCCTCTTCCCATGGCCAACATTAGTTCCGATGCTGCAGTGTTTGATATAGAATATGCGAGGTGGCTAGAGGAACACCATCGTCTAATGTGCGAGCTCAGAGCTGCAGTACAAGAGCATCTCCCGGAGACCGAGCTTCGGCTGTTTGTGAACAATTGCTTAGCACACTACGACGAAGTAATGAATCTCAAAAGCATGGTTGCCAAAACTGATGTATTTCATCTCGTTTCTGGTACGTGGAAAACCCCGGCTGAACGTTGCTTCATGTGGATCGGTGGTTTCAGGCCCTCTGAAGTAATTAAGGTTATTATGCACCAACTTGAACCCTTAACTGAGCAACAACTACTCGGTATCTGTGGTTTGCAACAATCGACTCAACATGCAGAGGACGCTCTATCGCAAGCGCTCGAGGGTCTAAATCAGTCTCTGTCGGAAACAATAACCTCGGATTCATTGAGCTGTGTCCCTCACATGGCTAATTACATGGGGCAGATGGCAATTGCAATGAACAAGCTTTCTACCCTTGAAGGTTTCGTTAGACAGGCAGATGGTCTTAGGCATCAGACGCTTCACCGTCTTAATCAACTCCTTACAACACGACAAGCAGCGAGGTGTTTGTTGGCAATTGCAGAGTATTTTCATCGTCTCAGAGCGCTTAGTTCTCTATGGCTTGCACGCCCTCGACAAGAATGA 1413 0.465 MAYNIDKVCQQWTGHPESTPPPQNHSHLIHHQQQLHKHQVDSFGMMQSSSSSSIPANFMSKDAGAYDFGELDSALFFYLDGQDPSTIQEQRQNSGMRPPTLNIFPSQPMHVEPPSTKASADLVSPLNSSSKRPSEPSMDLPNARTDAPSEPTKAVKRENHRKGPTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLNQLEQELQRARAQGMFYGGSGLPGDQQGLPLPMANISSDAAVFDIEYARWLEEHHRLMCELRAAVQEHLPETELRLFVNNCLAHYDEVMNLKSMVAKTDVFHLVSGTWKTPAERCFMWIGGFRPSEVIKVIMHQLEPLTEQQLLGICGLQQSTQHAEDALSQALEGLNQSLSETITSDSLSCVPHMANYMGQMAIAMNKLSTLEGFVRQADGLRHQTLHRLNQLLTTRQAARCLLAIAEYFHRLRALSSLWLARPRQE* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01705 470 CDD bZIP_HBP1b-like 179 231 - -
Pte6g01705 470 FunFam BZIP family transcription factor 178 227 - -
Pte6g01705 470 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 182 197 IPR004827 GO:0003700|GO:0006355
Pte6g01705 470 MobiDBLite consensus disorder prediction 87 181 - -
Pte6g01705 470 Coils Coil 198 225 - -
Pte6g01705 470 PANTHER TRANSCRIPTION FACTOR TGA9 90 469 - -
Pte6g01705 470 MobiDBLite consensus disorder prediction 38 54 - -
Pte6g01705 470 MobiDBLite consensus disorder prediction 150 167 - -
Pte6g01705 470 MobiDBLite consensus disorder prediction 12 54 - -
Pte6g01705 470 MobiDBLite consensus disorder prediction 12 29 - -
Pte6g01705 470 MobiDBLite consensus disorder prediction 87 101 - -
Pte6g01705 470 MobiDBLite consensus disorder prediction 120 136 - -
Pte6g01705 470 Pfam Seed dormancy control 270 344 IPR025422 GO:0006351|GO:0043565
Pte6g01705 470 SUPERFAMILY Leucine zipper domain 179 221 IPR046347 GO:0003700|GO:0006355
Pte6g01705 470 ProSiteProfiles DOG1 domain profile. 252 466 IPR025422 GO:0006351|GO:0043565
Pte6g01705 470 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 177 221 IPR004827 GO:0003700|GO:0006355
Pte6g01705 470 SMART brlzneu 175 247 IPR004827 GO:0003700|GO:0006355
Pte6g01705 470 Gene3D - 178 227 - -
Pte6g01705 470 Pfam bZIP transcription factor 179 217 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01705 Pte-Chr6 34312846 34318945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01705 56 470 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 65.760 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte6g01705 DOG1 1.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01705 K14431 - tcc:18599070 712.605