Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01701 ATGGGTATCCTTTTGCAAGGTGTTCTTATTAATTTGGCGTTGCTGGTGTTTTTTCTTTCTACTCTTCATGTCCATGCGAAAGTTATGCCAGGTGGAAAAGTGAGACCTGACAAGCATCAGCAAGTGGTCGTGGCCAATCGGCCAAGGTTCAAACCTGGACCGTGGAAAAAAGCCAAGACTACCTTCTATGGAGGAAACTCCAGATCGTTTGGAGGAGCTTGCGGATATGAGGATGTGGAGAAACTAGGGTTTGGTGATACGACATCATTGAACCCAGATATTTTTCGTAATGGGCAGACTTGTGGAGCATGTTATGAAATCCTTTGTGTGGACTCTAAATGGTGCAAGAAGGGGCAGAAGTCAATTGTTGTTTCTGCAACAAACACTGGAGCCCATGAACATTTCGATTTAGCCCAGCCTTCCTTCCTCAAAATTGCGGAGTCTCAGGGTGGCATCGTTCCTGTCCGATATAGAAGAGTACCATGCAAGAAAAAGGGAGGGATCAAATTCAAGCTGACTGGGAATCCACACTTCAATGAAGTTCTGGTATATAATGTTGGGGGTGCGGGAGATGTGATAAGCCTTCAAGTGAAAGGAGATGGCAAGCTTAAATGGACACCTATGAAGCGACTTTGGGGACAGAAATGGGTGTCCAATGCCAACATGACCGGGCAATCACTCACCTTCAGAGTTGGAACAAGCGATGGAAAGGTCTCTACCTCTTGGCATGTTTGTCCCAAGAATTGGCAATTCGGCCAAACCTTCGAAGGCAAAAACTACCACTAG 786 0.4593 MGILLQGVLINLALLVFFLSTLHVHAKVMPGGKVRPDKHQQVVVANRPRFKPGPWKKAKTTFYGGNSRSFGGACGYEDVEKLGFGDTTSLNPDIFRNGQTCGACYEILCVDSKWCKKGQKSIVVSATNTGAHEHFDLAQPSFLKIAESQGGIVPVRYRRVPCKKKGGIKFKLTGNPHFNEVLVYNVGGAGDVISLQVKGDGKLKWTPMKRLWGQKWVSNANMTGQSLTFRVGTSDGKVSTSWHVCPKNWQFGQTFEGKNYH* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01701 261 PRINTS Expansin/Lol pI family signature 54 69 IPR007118 GO:0005576
Pte6g01701 261 PRINTS Expansin/Lol pI family signature 205 219 IPR007118 GO:0005576
Pte6g01701 261 PRINTS Expansin/Lol pI family signature 243 257 IPR007118 GO:0005576
Pte6g01701 261 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 71 167 IPR007112 -
Pte6g01701 261 Gene3D - 40 163 IPR036908 -
Pte6g01701 261 SUPERFAMILY PHL pollen allergen 164 257 IPR036749 -
Pte6g01701 261 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 177 257 IPR007117 -
Pte6g01701 261 Pfam Lytic transglycolase 88 157 IPR009009 -
Pte6g01701 261 PANTHER EXPANSIN-A15 24 259 IPR002963 GO:0009664
Pte6g01701 261 Pfam Expansin C-terminal domain 168 246 IPR007117 -
Pte6g01701 261 SUPERFAMILY Barwin-like endoglucanases 54 185 IPR036908 -
Pte6g01701 261 Gene3D - 164 260 IPR036749 -
Pte6g01701 261 PRINTS Expansin signature 214 235 IPR002963 GO:0009664
Pte6g01701 261 PRINTS Expansin signature 243 259 IPR002963 GO:0009664
Pte6g01701 261 PRINTS Expansin signature 178 199 IPR002963 GO:0009664
Pte6g01701 261 PRINTS Expansin signature 108 119 IPR002963 GO:0009664
Pte6g01701 261 SMART dpbb_1 87 157 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01701 Pte-Chr6 34290862 34292002 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01701 45 261 Expansin Gene Family AT3G55500 50.420 1.34e-75 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01701 - - zju:107431981 322.013