Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01690 ATGAATCATTTGACTGTAGAGACTGAAGATTCCTTTGCAAGCTTGCTTGAGCTTGCTGCCAATAATGATATTGAGGGTTTCCAAAGATCAATTGAGTGTGATCCTACGTGTGTTGATGAGGTTGGACGGTGGTATAGTCGCAGAAAAGGCTCAAAGCAGATGGTTAATGAGCATCGAACGCCTTTGATGATAGCTGCCACTTATGGTAGCATTGATGTTATGAAACTGATCCTGGCATTGTCTGATGCTGATGTTAATAGAACTTGTGGCCTTGACAAGACTACTGCACTTCACTGTACCGTGTCTGGTGGGGCTATAAATGCAGTTGATGTTGTGAAATTGCTTTTAGCTGCTGGTGCTGATCCAAATACTGTGGATGCCAATGGTCATAGGCCAATTGATGTCATTGTTGTTCCTCCAAAGCTTCAGGGTCTCAAGTTTAATCTTCAAGAACTTCTCTGTACTGATGGTTCTTTTTCAAAGTGCAACCTTAGGGTCTCAATAGTCATGTCAAATGCAAGTTCACCTCCTCTATCAACTTCCCCAGAGAATGGATCCCCATCTTTTGCTATGGATTTCCAATTGAAGCTGAAGTCTAACGAGTTTCCTGGTCAATCTGCATCAGAGAAGAAGGAATATCCTGTTGACCCTTCTTTGCCAGACATTAAGAATAGTATATATTCAACGGATGAGTTCAGGATGTATTCGTTTAAGGTGCGACCATGTTCGCGTGCCTATTCCCATGATTGGACTGAGTGCCCTTTTGTCCATCCAGGGGAGAATGCTCGGAGAAGGGATCCTAGGAAGTTTCATTATAGCTGTGTCCCTTGTCCTGATTTTCGAAAGGGGGCTTGTAGACGCGGAGATATGTGCGAGTATGCTCATGGTGTTTTTGAATGCTGGCTGCATCCAGCACAATACCGAACTAGACTTTGCAAGGATGGTACGAGCTGCTCCAGAAGGGTCTGTTTCTTTGCGCACACTGCTGAGGAACTCCGACCTCTGTATGTTTCAACTGGTTCTGCTGTTCCTTCTCCCCGTTCAAATAATTCATCTGCCATGGACTTTACTTCAGCCATGAACATGTTACCTGGATCTCCGTCATCATTGTCTGTAATGTCCCCATCACCATTTACTCCACCTATGTCTCCATCTGGTAACGGTATGACACATGGTTCTGCTCCTTGGCCTCAGCAAAATGTCCCATCGTTGCATTTGCCAGGCAGCAATCTTCAGTCTAGTCGATTGAGATCATCCTTCAGTGCTAGAGATATTCCTGCAGAGGATTTTGAGTTGTTGTCAGATTATGATATTCAGCAACAGCAACTTCTTAATGAATTAACCTGTCTCTCTCAACAACCTCTCAATTCTAATTCTTTAAACTGCCCAGGCCGGTTGAAGATCATGACCCCTTCAAATCTTGATGATCTGTTTTCTACAGAGAGCTCCTCTCCTAGATTTGCCGAACAAGCAATGGGGGCATCTATTTTCTCACCAACACACAAAACAGCTGTTCTGAATCAATTTCAGCAGCAGCAAATCATGCTGTCGCCAGTTAACACAAATTTCTCAATTAAGAATTCTGACAATCCTTTATTGCAGGCCTCTTTTGGGGTGCAAACATCAGGAAGGATGTCTCCACGTAATGTGGAACCAATTTCACGTAATGCGGAACCTATTTCACCCATGAGCTCTCGCATTTCTATGCTCGCTCAACGTGAAAAGCAGCAGCAATTCAGGAGCCTGAGCTCTCGCGAACTTGGTTACAACGCTGCAGGTGTCGCAGGGGCTTCAGTCAATCCTTGGTCTAAATGGGGATCATCAAACGGAAAGTTGGATTGGGCTGTTGGTCCGGATGAATTGGGTAAGCTTCGGAGGACATCTTCTTTTGAGCTTGGGAATAATGGTGATGAGCCTGATTTGTCATGGGTTCAGTCACTTGTTAAAGAGTCTCCTATTGACATTAAGGAAAAGTTGGTGGCCGCTAATTCCTCAGCTGACCGTTCAAATATGAATATACCAATGGAGTCTGTTGATCATGCTGTATTGGGAGCATGGCTTGAACAGATGCAGCTTGATCATCTTGTTGCACAACAGAACTAA 2103 0.4427 MNHLTVETEDSFASLLELAANNDIEGFQRSIECDPTCVDEVGRWYSRRKGSKQMVNEHRTPLMIAATYGSIDVMKLILALSDADVNRTCGLDKTTALHCTVSGGAINAVDVVKLLLAAGADPNTVDANGHRPIDVIVVPPKLQGLKFNLQELLCTDGSFSKCNLRVSIVMSNASSPPLSTSPENGSPSFAMDFQLKLKSNEFPGQSASEKKEYPVDPSLPDIKNSIYSTDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCSRRVCFFAHTAEELRPLYVSTGSAVPSPRSNNSSAMDFTSAMNMLPGSPSSLSVMSPSPFTPPMSPSGNGMTHGSAPWPQQNVPSLHLPGSNLQSSRLRSSFSARDIPAEDFELLSDYDIQQQQLLNELTCLSQQPLNSNSLNCPGRLKIMTPSNLDDLFSTESSSPRFAEQAMGASIFSPTHKTAVLNQFQQQQIMLSPVNTNFSIKNSDNPLLQASFGVQTSGRMSPRNVEPISRNAEPISPMSSRISMLAQREKQQQFRSLSSRELGYNAAGVAGASVNPWSKWGSSNGKLDWAVGPDELGKLRRTSSFELGNNGDEPDLSWVQSLVKESPIDIKEKLVAANSSADRSNMNIPMESVDHAVLGAWLEQMQLDHLVAQQN* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01690 700 MobiDBLite consensus disorder prediction 339 358 - -
Pte6g01690 700 Gene3D - 9 140 IPR036770 -
Pte6g01690 700 SUPERFAMILY Ankyrin repeat 52 136 IPR036770 -
Pte6g01690 700 PRINTS Ankyrin repeat signature 111 125 IPR002110 GO:0005515
Pte6g01690 700 PRINTS Ankyrin repeat signature 58 73 IPR002110 GO:0005515
Pte6g01690 700 SMART ANK_2a 92 124 IPR002110 GO:0005515
Pte6g01690 700 SMART ANK_2a 57 87 IPR002110 GO:0005515
Pte6g01690 700 MobiDBLite consensus disorder prediction 367 398 - -
Pte6g01690 700 PANTHER UNKEMPT FAMILY MEMBER 17 651 IPR045234 -
Pte6g01690 700 FunFam Zinc finger CCCH domain-containing protein 66 229 297 - -
Pte6g01690 700 MobiDBLite consensus disorder prediction 341 358 - -
Pte6g01690 700 Gene3D - 271 334 - -
Pte6g01690 700 SMART c3hfinal6 271 297 IPR000571 GO:0046872
Pte6g01690 700 SMART c3hfinal6 306 329 IPR000571 GO:0046872
Pte6g01690 700 ProSiteProfiles Ankyrin repeat profile. 92 127 IPR002110 GO:0005515
Pte6g01690 700 ProSiteProfiles Zinc finger C3H1-type profile. 276 298 IPR000571 GO:0046872
Pte6g01690 700 Pfam Ankyrin repeats (3 copies) 53 126 IPR002110 GO:0005515
Pte6g01690 700 MobiDBLite consensus disorder prediction 383 398 - -
Pte6g01690 700 ProSiteProfiles Ankyrin repeat region circular profile. 92 126 - -
Pte6g01690 700 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 276 296 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01690 Pte-Chr6 34199873 34203870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01690 5 693 C2H2 Transcription Factor Family AT5G12850 51.124 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pte6g01690 Ank_2 1.2e-08 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01690 - - qsa:O6P43_006533 1110.52