Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01686 ATGGCTCCTGAAGTGCTCAGAAGGAACTTTGGGCCAGAAATAGATATCTGGAGTGCTGGTGTAATTCTGTATATACTACTTTGTGGAGTACCACCTTTCTGGGCAGATCCTTGGCCAAAGGTTTCTGATAATGCCAAAGACCTTGTGAAGAAAATGCTTTACTCTGATCCGAAAAGGAGGCTAACTGCCCAAGAAGTACTAGATCATCCTTGGTATCAAAATGCGAAGAAAGCTCCAAACGTTTCATTAGGTGAAACTTTTAGAGCGAGACTCAAGCAGTTCTCTGTAATGAACAAGCTTAAGAAGAGAGCTCTAAGGGTAATTGCTGAACACTTGTCAGTAGAAGAAGTTGCTGGAATTAAGGAAGGATTCAAAATTATGGACACAGGCAATAAAGGAAAGATTGACATAGACGACTTGAGAATAGGACTGCATAAACTAGGTCATCAAATGGCTGATGGAGATATTCAAATTCTAATGGAAGCTGGTGATTTAGACAAGGACGGGTATCTTGATTACGGAGAATTTGTAGCCATTTCTATTCACCTCAGAAAGATGGGCAATGATGAGCATCTTCGTAAAGCCTTTCAGTTCTTTGATCAAAATCAAAGTGGATATATAGAAATGGAGGAACTTCGGGATGCATTAGCTAATGAAGTGGATGCAAACAATGAGGAAGTTATGAATGCTATCATGAATGATGTGGACATAGACAAGGACGGACAAATAAGTTATGAGGAATTTGTTGCCATGATGAAGGCTGGGACGGATTGGAGAAAAGCATCAAGGCAGTACTCACGCGAACGGTTTACAAGTCTCAAGTCTCATTTTGATGAGAAATGGATCGGTTCAATCAAATGA 861 0.403 MAPEVLRRNFGPEIDIWSAGVILYILLCGVPPFWADPWPKVSDNAKDLVKKMLYSDPKRRLTAQEVLDHPWYQNAKKAPNVSLGETFRARLKQFSVMNKLKKRALRVIAEHLSVEEVAGIKEGFKIMDTGNKGKIDIDDLRIGLHKLGHQMADGDIQILMEAGDLDKDGYLDYGEFVAISIHLRKMGNDEHLRKAFQFFDQNQSGYIEMEELRDALANEVDANNEEVMNAIMNDVDIDKDGQISYEEFVAMMKAGTDWRKASRQYSRERFTSLKSHFDEKWIGSIK* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01686 286 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 248 - -
Pte6g01686 286 SMART efh_1 227 255 IPR002048 GO:0005509
Pte6g01686 286 SMART efh_1 155 183 IPR002048 GO:0005509
Pte6g01686 286 SMART efh_1 119 147 IPR002048 GO:0005509
Pte6g01686 286 SMART efh_1 191 219 IPR002048 GO:0005509
Pte6g01686 286 FunFam Calcium-dependent protein kinase 7 81 256 - -
Pte6g01686 286 Coils Coil 206 226 - -
Pte6g01686 286 Gene3D - 80 256 - -
Pte6g01686 286 ProSiteProfiles EF-hand calcium-binding domain profile. 223 258 IPR002048 GO:0005509
Pte6g01686 286 ProSiteProfiles Protein kinase domain profile. 1 72 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01686 286 Gene3D Transferase(Phosphotransferase) domain 1 1 79 - -
Pte6g01686 286 Pfam EF-hand domain pair 120 179 IPR002048 GO:0005509
Pte6g01686 286 Pfam EF-hand domain pair 190 253 IPR002048 GO:0005509
Pte6g01686 286 ProSitePatterns EF-hand calcium-binding domain. 164 176 IPR018247 -
Pte6g01686 286 CDD EFh 191 253 IPR002048 GO:0005509
Pte6g01686 286 ProSitePatterns EF-hand calcium-binding domain. 200 212 IPR018247 -
Pte6g01686 286 SUPERFAMILY EF-hand 101 279 IPR011992 -
Pte6g01686 286 ProSiteProfiles EF-hand calcium-binding domain profile. 187 222 IPR002048 GO:0005509
Pte6g01686 286 ProSiteProfiles EF-hand calcium-binding domain profile. 115 150 IPR002048 GO:0005509
Pte6g01686 286 ProSitePatterns EF-hand calcium-binding domain. 236 248 IPR018247 -
Pte6g01686 286 Pfam Protein kinase domain 1 71 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01686 286 SUPERFAMILY Protein kinase-like (PK-like) 1 95 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01686 Pte-Chr6 34177248 34179022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01686 1 273 EF-hand Containing Proteins AT5G19450 72.696 4.22e-155 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte6g01686 Pkinase 1.3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01686 K13412 - tcc:18598981 467.618