Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01681 ATGATTGCTCTTTTGTGCCTGCTATCCCTTTTGCTGTCTGGCTTCGTCTACAAGTTTCAGCTGGTGCGTGCTGAGCTCCAAGACGAAGCCACATTGCTTGCGATCAACAAAGAGCTTGGAGTACCTGGATGGGATGTCAATAACTCAAACTACTGCACCTGGCCTGGTATCAGGTGCGATATCCATCACTCAAGGGTGGAAAGGCTCGATCTTTCTCGTCATGACCTCAGAGGTAATGCCACATTAATCTCAGAGCTCAAGGCATTGAAGTGGCTGGACCTTTCAAACAACAATTTCCGTGGTTTCATTCCTCCATCATTTGGTAACTTGTCTAAGCTTGAAGTTCTTGATTTGTCTCTGAATAAGTTTGAGGGTCCAATTCCTCTAGAGCTTGGTGGTCTCAGAAACCTTAAATCATTAAACCTGTCCAACAATTTGCTGGTGGGAGATATCCCAAATGAGCTTCACGCCTTAGAGAAATTGCAGGAGATTCAAATTTCCAGCAATAGGTTGAGCGGTTCAATACCATCTTGGGTGGGCAATTTGACCAATCTGAGAGTCTTCACTGCCTATGAAAATGGTTTAGATGCTGGTGTCCCAGATAATCTAGGCTTATCTTCTCAGCTTCAGTTATTGAATCTGCATTCAAACAAACTTGAAGGTCCAATCCCAAAGAGCATTTTCGTTTCAGGGAAGCTGGAGGTTTTGGTTCTGACACAGAATAATTTGAGCGGTAATCTTCCTGAAGAAATTGGGAATTGCTCAGGCCTTTCTAACGTCAGAATTGGCAACAATCATCTAACGGGCAATATTCCCAAGACGATAGCCAACGTTAGTAGTCTTACTTATTTTGAAGCTGATGATAACAACCTATCTGGTGAGATGGTTGCTGAGTTTTCCAGGTGTTCTAATCTAACCCTGCTAAATCTTGCTTCAAATGGATTTACTGGAAACATTCCTGAAGAAATAGGACAGTTAATGAATCTTCAGGAACTAATTCTTTCTGGAAATAATTTATTTGGTGAAATTCCCAATTCAATTCTGAAGTGCAGGAGTCTTAACAAGCTTGATCTAAGCAGTAACAGATTCAATGGTACCATACCAAACGAAATCTGTGACATGTTGAGACTGCAGTATCTGCTATTGAGCCAAAATTCGATTAGGGGGGAGATACCTCGTGAAATTGGGAATTGTGTGAAATTGCTTGAACTGCAACTAGGCAGTAACTATTTAACTGGAACTATCCCTTCTGAGATTGGTCGTATAAGGAACTTACAGATAGCCCTAAACTTGAGCTTCAATCATCTCCATGGACCCTTGCCTGCTGATCTAGGAAGGCTTGACAAGCTAGTCTCTTTGGATGTTTCCAACAATCAGCTCTCTGGTAATATCCCACCTGAGCTAAGAGGCATGTTGAGCTTGATAGTGGTCAATTTTTCAAATAATCAGCTCTCAGGTCCCGTTCCTTTGTTTGTACCACTCCAGAAAAGCCCAAACTCCAGCTTCTCAGGTAATAAAGGGCTTTGTGGAGAACCACTGAGTTCTATATGCAACAGTCCTTATAGCGCTGACCACAAAAGTTACCATCATAGAGTTTCCTATAGAATCATAATAGCAGTTATCGGTTCTGGTCTGGCAGTTTTTATATCAGTAACCATAGTTGTTCTTCTATTCATGGCCAGAGAGAGACAAGAGAAAATTGCCAAAGATACTGAGACTGCAGATGACACACCCAACATCCGCCCTACCATAACGGCAGGTAACGTTTTCATTGATAATCTAAAACAAGCTATAGACCTTGAAGCCGTTGTGAATGCCACTCTCAAAAATTCCAATAAGGTTAGTAGTGGAACCTTCAGCACGATTTACAAAGCTATCATGCCTTCTGGAATGATATTAACAGTGAAAAAGCTGAAATCCATGGACAAGACTTTAGTTCATCACCAGAACAAGATGATTAGAGAACTTGAAAGACTGAGCAAACTCTGTCATGATAATCTAGTCCGACCCTTGGGCTATGTTATCTATGAAGACGTTGCTCTTCTGCTGCAGCATCACTTACCTAATGGAACATTAGCTCAGCTTCTTCACGAATCAACAAAGGAACCTGAATATCGACCTGACTGGCCAATAAGACTTTCAATTGCTATTGGAGTGGCAGAAGGGTTGGCTTTCCTTCATCATTTGGCAGTTATCCATCTTGACATTTCCTCTGGTAATGTGCTCCTGGATGGAGACTTCAAGCCTTTGGTTGGAGAAATTGAGATTTCAAAACTTATTGATCCAACCAAAGGTACTGCCAGTATAAGTCAAGTTGCAGGCTCTTTTGGCTATATCCCACCAGAGTATGCGTATACAATGCAAGTTACAGCACCAGGAAATGTATACAGCTATGGTGTTATTCTGCTTGAGATCCTTACAACTCGACTGCCAGTTGATGAAGCTTTTGGTGAAGGCGTGGATTTGGTGAAGTGGGTTCACAGTGCTCCTATTAGAAGTGAAACTCCTGAACAGATACTGGATGCAAGACTTAGCACAGTTTCCTTTGGTTGGAGGAAAGAAATGCTGGCTGCCCTTAAGGTTGCATTACTCTGCACAGATAGCACACCTGCCAAAAGACCAAGAATGAAGAAGGTAGTAGAAATGCTTCAAGAAATCAGGCAGTGCTGA 2670 0.4206 MIALLCLLSLLLSGFVYKFQLVRAELQDEATLLAINKELGVPGWDVNNSNYCTWPGIRCDIHHSRVERLDLSRHDLRGNATLISELKALKWLDLSNNNFRGFIPPSFGNLSKLEVLDLSLNKFEGPIPLELGGLRNLKSLNLSNNLLVGDIPNELHALEKLQEIQISSNRLSGSIPSWVGNLTNLRVFTAYENGLDAGVPDNLGLSSQLQLLNLHSNKLEGPIPKSIFVSGKLEVLVLTQNNLSGNLPEEIGNCSGLSNVRIGNNHLTGNIPKTIANVSSLTYFEADDNNLSGEMVAEFSRCSNLTLLNLASNGFTGNIPEEIGQLMNLQELILSGNNLFGEIPNSILKCRSLNKLDLSSNRFNGTIPNEICDMLRLQYLLLSQNSIRGEIPREIGNCVKLLELQLGSNYLTGTIPSEIGRIRNLQIALNLSFNHLHGPLPADLGRLDKLVSLDVSNNQLSGNIPPELRGMLSLIVVNFSNNQLSGPVPLFVPLQKSPNSSFSGNKGLCGEPLSSICNSPYSADHKSYHHRVSYRIIIAVIGSGLAVFISVTIVVLLFMARERQEKIAKDTETADDTPNIRPTITAGNVFIDNLKQAIDLEAVVNATLKNSNKVSSGTFSTIYKAIMPSGMILTVKKLKSMDKTLVHHQNKMIRELERLSKLCHDNLVRPLGYVIYEDVALLLQHHLPNGTLAQLLHESTKEPEYRPDWPIRLSIAIGVAEGLAFLHHLAVIHLDISSGNVLLDGDFKPLVGEIEISKLIDPTKGTASISQVAGSFGYIPPEYAYTMQVTAPGNVYSYGVILLEILTTRLPVDEAFGEGVDLVKWVHSAPIRSETPEQILDARLSTVSFGWRKEMLAALKVALLCTDSTPAKRPRMKKVVEMLQEIRQC* 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01681 889 Gene3D Transferase(Phosphotransferase) domain 1 687 889 - -
Pte6g01681 889 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 578 686 - -
Pte6g01681 889 ProSiteProfiles Protein kinase domain profile. 608 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01681 889 Gene3D Ribonuclease Inhibitor 132 230 IPR032675 -
Pte6g01681 889 SMART LRR_typ_2 374 398 IPR003591 -
Pte6g01681 889 SMART LRR_typ_2 86 109 IPR003591 -
Pte6g01681 889 SMART LRR_typ_2 158 182 IPR003591 -
Pte6g01681 889 SMART LRR_typ_2 447 470 IPR003591 -
Pte6g01681 889 SMART LRR_typ_2 326 350 IPR003591 -
Pte6g01681 889 SMART LRR_typ_2 134 157 IPR003591 -
Pte6g01681 889 SUPERFAMILY L domain-like 194 517 - -
Pte6g01681 889 Gene3D Ribonuclease Inhibitor 231 520 IPR032675 -
Pte6g01681 889 Gene3D Ribonuclease Inhibitor 24 131 IPR032675 -
Pte6g01681 889 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 687 889 - -
Pte6g01681 889 FunFam Nuclear pore complex protein NUP107 26 176 - -
Pte6g01681 889 SUPERFAMILY Protein kinase-like (PK-like) 608 886 IPR011009 -
Pte6g01681 889 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 280 887 - -
Pte6g01681 889 Pfam Protein kinase domain 610 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01681 889 Gene3D Phosphorylase Kinase; domain 1 577 685 - -
Pte6g01681 889 SUPERFAMILY L domain-like 65 226 - -
Pte6g01681 889 Pfam Leucine rich repeat 328 387 IPR001611 GO:0005515
Pte6g01681 889 Pfam Leucine rich repeat 88 147 IPR001611 GO:0005515
Pte6g01681 889 ProSiteProfiles Leucine-rich repeat profile. 136 158 IPR001611 GO:0005515
Pte6g01681 889 ProSitePatterns Tyrosine protein kinases specific active-site signature. 731 743 IPR008266 GO:0004672|GO:0006468
Pte6g01681 889 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 226 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01681 Pte-Chr6 34138575 34141481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01681 2 888 Receptor kinase-like Gene Family AT2G41820 72.410 0.0 1308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte6g01681 Pkinase 3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01681 - - cave:132162539 1380.93