Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01670 ATGGAAAGCACTGTACTGTCCGATAGTGATAAGGGATTGTTGGAAAGTGTACGGAAGTCCAACCCATCGCCATTTTTGCTGAAAACATATATACTGGTGGAGGATGCAAACACAAATGATTTTATATCTTGGAACGAACAAGGGACTGGATTTGTGGTATGGCAACCATTTGAGTTTGCTCGTGATCTTCTACCAACGCTTTTCAAGCACAGCAATTTCTCAAGCTTTGTACGGCAGCTGAATACCTATGGTTTTCGTAAGGTTGCAACGAACAGGTGGGAGTTTTGCAATGACTTATTTCGCAAGGGTGAGAAAGGCCTGCTATGTGACATCCGGAGAAGAAAAGCTTGGGTTAGCAAGCAACAATCAGGAGCACCAAAACATCTTGAGCATGATGAGGACGACCAAAGGTCGTCATCGACTTCATCATCTTCAGGTTACACCACTCTGATTGATGAGAACAAGCGACTCAAGAAAGAGAATGGGATGCTAAACTTGGAGCTTAGTTGTACGAGAAAGAAATGCAACGAGCTACTTGATTTGGTGGCTAAACATTCTCATGAAGTTGAGGGAAAAAAGAGAGGTGATCACAGACCAAAGTTGTTTGGGGTTGCATTAGAGGTTCAAGGAGAAAGGAACATGAAGAGAAAGCGTGCTGAGGTTGATGAAGGGGGAAAAACAGGTGGTTTCCAAGGAAGTTTACAGACCATAACCCAAGGAAATGGAAGTGAGATCAGGAGAGAGGACAGCGCTTCCTTACTGCTGTATGCATGGTTCTATTAG 783 0.4368 MESTVLSDSDKGLLESVRKSNPSPFLLKTYILVEDANTNDFISWNEQGTGFVVWQPFEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATNRWEFCNDLFRKGEKGLLCDIRRRKAWVSKQQSGAPKHLEHDEDDQRSSSTSSSSGYTTLIDENKRLKKENGMLNLELSCTRKKCNELLDLVAKHSHEVEGKKRGDHRPKLFGVALEVQGERNMKRKRAEVDEGGKTGGFQGSLQTITQGNGSEIRREDSASLLLYAWFY* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01670 260 Gene3D - 17 115 IPR036388 -
Pte6g01670 260 MobiDBLite consensus disorder prediction 122 152 - -
Pte6g01670 260 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte6g01670 260 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte6g01670 260 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte6g01670 260 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte6g01670 260 SUPERFAMILY "Winged helix" DNA-binding domain 20 114 IPR036390 -
Pte6g01670 260 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 18 193 IPR027725 -
Pte6g01670 260 FunFam Heat stress transcription factor B-4 17 115 - -
Pte6g01670 260 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte6g01670 260 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01670 Pte-Chr6 34032047 34033998 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01670 22 207 HSF AT2G41690 54.106 1.31e-66 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pte6g01670 HSF_DNA-bind 1.2e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01670 K09419 - qsu:112013936 315.464