Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01665 ATGTCCCTAGAGGACTCTCTGAGATCTCTGTCACTCGATTATTTGAACCTGCTCATCAATGGCCAAGCTTTCAGTGACGTAACTTTCAGCGTTGAGGGTCGTTTAGTCCACGCACACCGTTGCATCCTTGCTGCCAGAAGCTTCTTCTTCAGGAAATTCTTCTGTGGTCCGGACCCTCCATCAGGGCTCGACCCTTCTGGGGCACGCGTCAACTCCGCCACTTCCACGTCTAGAGCACAAGGAGCTGGGGTCATACCGGTCAACTCAGTGGGCTACGAGGTGTTCTTGTTGCTTTTGCAGTTCCTCTACAGTGGTCAGGTCTCTATTGTTCCCCAGAAGCATGAACCAAGGCCAAATTGTGGTGAGAGAGGCTGTTGGCACACGCATTGCACCTCAGCCGTTGATCTTGCCCTCGACACTCTTGCTGCTGCTAGATCCTTTGGTGTCGATCAACTTGCATTGCTCACTCAGAAGCAATTGGCAAGCATGGTGGAGAAGGCCTCAATTGAAGATGTGATGAAAGTTCTTCTAGCATCAAGGAAGCAAGACATGCATCAGCTCTGGACCACTTGCTCCCACCTTGTTGCAAAGTCTGGCCTCCCACCTGAAGTTCTAGCCAAACACCTTCCTATCGACATTGTTGCCAAGATCGAAGAGCTTCGTCTCAAGACTTCCCTGACTCGTCGCTCAAGCTTTTCGCCGCACCACCACCACCACCACCACCACCACCATCACCATGATCTTGGCGTTGCAGCTGATCTTGAGGAGCAAAAGATTCGGCGAATGAGAAGGGCACTCGATTCATTCGATGTAGAACTAGTTAAGCTCATGGTCATGGGTGAAGGCCTAAACTTAGACGAAGCGTTGGCCTTGCATTATGCCGTAGAGAACTGCAGCCGTGAGGTGGTGAAGGCGTTGCTTGAGCTTGGAGCTGCAGATGTAAACTATCGTGCGGGGCCTGCTGGCAAATCTCCACTTCACATTGCTGCAGAGATGGTCTCTCCTGACATGGTGGCTGTACTTCTTGATCATCATGCTGATCCAAATGTTCGTACGGTCGATGGAGTCACTCCTCTCGATATACTCCGAACCCTAACCTCTGATTTTCTTTTCAAAGGAGCAGTGCCTGGACTAACACATGTGGAACCCAATAAGCTTAGACTGTGCCTGGAGCTTGTTCAGTCCGCAGCTCTTGTGATTTCTCGAGAAGAAGGTAATGCAGACCCTCCTACTTCAACAGCTATTTACCCACCAATGGGTGAAGATCATCGCAGCAGCAGTGGTAATAGTAACATTGCTAACCTCAACCTTGATTCAAGGTTGGTTTATCTCAATCTAGGTGCAACGGCTTCAGCTCCATTGGGTTCAAGATTGGATGAAGATGATAATAATAGCCACAATACTCAGAGGGATCATGCTATGCATCGTCATGGAGCACAAGTTGGTGGGTGTGACCCTACAATGTACCACCGCTCTGGTGACTTTTGA 1488 0.498 MSLEDSLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSFFFRKFFCGPDPPSGLDPSGARVNSATSTSRAQGAGVIPVNSVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARSFGVDQLALLTQKQLASMVEKASIEDVMKVLLASRKQDMHQLWTTCSHLVAKSGLPPEVLAKHLPIDIVAKIEELRLKTSLTRRSSFSPHHHHHHHHHHHHDLGVAADLEEQKIRRMRRALDSFDVELVKLMVMGEGLNLDEALALHYAVENCSREVVKALLELGAADVNYRAGPAGKSPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHVEPNKLRLCLELVQSAALVISREEGNADPPTSTAIYPPMGEDHRSSSGNSNIANLNLDSRLVYLNLGATASAPLGSRLDEDDNNSHNTQRDHAMHRHGAQVGGCDPTMYHRSGDF* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01665 495 Gene3D Potassium Channel Kv1.1; Chain A 4 197 IPR011333 -
Pte6g01665 495 MobiDBLite consensus disorder prediction 230 246 - -
Pte6g01665 495 Pfam Domain of unknown function (DUF3420) 199 263 IPR024228 -
Pte6g01665 495 SUPERFAMILY POZ domain 8 162 IPR011333 -
Pte6g01665 495 MobiDBLite consensus disorder prediction 228 248 - -
Pte6g01665 495 MobiDBLite consensus disorder prediction 459 478 - -
Pte6g01665 495 ProSiteProfiles Ankyrin repeat region circular profile. 321 351 - -
Pte6g01665 495 ProSiteProfiles BTB domain profile. 25 111 IPR000210 GO:0005515
Pte6g01665 495 ProSiteProfiles Ankyrin repeat profile. 321 353 IPR002110 GO:0005515
Pte6g01665 495 Pfam BTB/POZ domain 16 112 IPR000210 GO:0005515
Pte6g01665 495 SMART BTB_4 25 164 IPR000210 GO:0005515
Pte6g01665 495 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 1 489 IPR044284 GO:0099402
Pte6g01665 495 SMART ANK_2a 286 316 IPR002110 GO:0005515
Pte6g01665 495 SMART ANK_2a 321 350 IPR002110 GO:0005515
Pte6g01665 495 CDD BTB_POZ_NPR_plant 8 164 - -
Pte6g01665 495 FunFam regulatory protein NPR5 isoform X1 4 197 - -
Pte6g01665 495 FunFam regulatory protein NPR5 isoform X2 252 369 - -
Pte6g01665 495 Pfam Ankyrin repeats (3 copies) 270 351 IPR002110 GO:0005515
Pte6g01665 495 MobiDBLite consensus disorder prediction 453 486 - -
Pte6g01665 495 SUPERFAMILY Ankyrin repeat 280 364 IPR036770 -
Pte6g01665 495 Gene3D - 253 369 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01665 Pte-Chr6 34003503 34006227 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pte6g01665 BTB 1.9e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01665 K14508 - zju:107433767 800.431