Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01654 ATGGCGTTCAAGATGTGCTGGATCCGATGGGTTAAGAGGCTCTTCGCTTCAGAAAAAGATAAAAAACCAAAGAAGTGGAGGTGGTGTTTCAGAAGTTTCAAGTTCACGCAGCGCCCCCCACTCACAGCATCAAACAAAACCCTTGTTGAAATAGCAGCTGAGCAGAGAAAGCATGCTTTGACTGTGGCCGTTGCAACAGCAGCAGCGGCTGAGGCTGCTGTTGCTGCAGCACATGCTGCTGCTGAAGTTGTCAGACTTACCGGTGCTTCTCGTAGTTATCATTATCTGTCAAAGGGAGACCGGAATTTGGCTGCTATTAAGATTCAAAGTGCATATCGTGGATATCTTGCAAGGAAAGCATTAAGGGCATTGAAAGGACTGGTGCGATTGCAAGCCATTTTTCGCGGTAGATCTGTGAGACGACAATTAGGCAGCAGTTTGAACCATTTGCCATCAGTTTCTAGAGTCCAGGCAAGCAAAAACAGTGGCACCTGCGTATGTAGAAGGAGAAAAGATTTTCCAAAGTCAAAAAAGGAGCTGGAAGAGAGGGAGCTAAAGGTGATAATGCAATCTGACTACAGTTGCCAGAGAAACTGGGATTGCAGCACGCAGTCAAGAGAAGAAATTGAAGCCATATCGTTAAAAAGGCAAGAAGCTGCTATCAAAAGAGAACGCATGAGGAAGTATTCATTCTCACACAGGGAGAGAAGAAATTCCCAGGTGTTGGAGGAGTCTTTCGTGAGCAAAGAATTGGGCAGAGGAAGTGGTCGGCTAGAACAATGGGTGGACAATGAAACAGGTGACAAGGATAGCATAGAAATTTCAAGAGCACATATTCCTTCAAATTGGAATGCTGGAGAAATTTGTGGAACACGTCACATCAAAGTGAAGAATCCAACCATGAAGAATACACTTGAAGAGCTGGTGTCTCAGCCGGAGTTTTCTTTTCCAAGGAGATCGTTTTGTCATTTAAACCAAAACTCAATCGGTAACGACACTTCCATGCCCAATTCTCCAGTTTTTCCAACATACATGGCTGTGACAGAATCGGCCAGAGCCAAGGTGAGATCAATGAGTACACCAAGGCAACGAGTAGGGTTGCTGGATATTTATCCGTCACATAAGGATGGAAACTCTTTTTGGTCTTCTTGTAATACTTCATCATCAATCGGCTACAGCAAAAATGGTGGCATGACCTTGCAGAATTGTTTAACAACGAACCACCATCAGTGA 1233 0.4453 MAFKMCWIRWVKRLFASEKDKKPKKWRWCFRSFKFTQRPPLTASNKTLVEIAAEQRKHALTVAVATAAAAEAAVAAAHAAAEVVRLTGASRSYHYLSKGDRNLAAIKIQSAYRGYLARKALRALKGLVRLQAIFRGRSVRRQLGSSLNHLPSVSRVQASKNSGTCVCRRRKDFPKSKKELEERELKVIMQSDYSCQRNWDCSTQSREEIEAISLKRQEAAIKRERMRKYSFSHRERRNSQVLEESFVSKELGRGSGRLEQWVDNETGDKDSIEISRAHIPSNWNAGEICGTRHIKVKNPTMKNTLEELVSQPEFSFPRRSFCHLNQNSIGNDTSMPNSPVFPTYMAVTESARAKVRSMSTPRQRVGLLDIYPSHKDGNSFWSSCNTSSSIGYSKNGGMTLQNCLTTNHHQ* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01654 410 Pfam IQ calmodulin-binding motif 104 122 IPR000048 GO:0005515
Pte6g01654 410 Pfam Protein of unknown function (DUF4005) 331 369 IPR025064 -
Pte6g01654 410 PANTHER IQ-DOMAIN 5-RELATED 7 381 - -
Pte6g01654 410 Gene3D - 100 149 - -
Pte6g01654 410 ProSiteProfiles IQ motif profile. 125 152 IPR000048 GO:0005515
Pte6g01654 410 ProSiteProfiles IQ motif profile. 101 129 IPR000048 GO:0005515
Pte6g01654 410 SMART iq_5 100 122 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01654 Pte-Chr6 33907197 33909885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01654 1 403 IQD Protein Family AT5G03960 43.765 3.16e-71 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01654 - - qlo:115953493 322.398